People
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Principal Researcher
Professor Ian Paulsen
Department of Chemistry and Biomolecular Sciences
Macquarie University
Sydney, NSW, Australia, 2109
Email: ian.paulsen at mq.edu.au
Phone: +61 2 9850 8152
Fax: +61 2 9850 8313
Research Interests
My research interests have focused on understanding microbial physiology and evolution, in particular in utilizing "big picture" or global approaches such as genome sequencing, bioinformatics, microarray analysis, and high throughput cloning, gene knockout, and phenotypic screening. My research interests have been focused in three broad areas:
- Genome diversity, metagenomics and lateral gene transfer
- System biology analysis of membrane transport and metabolism
- Applying Genomics to Medicine
Education
- Ph.D., Medicine, Monash University, Melbourne, Australia & University of Sydney, Sydney, Australia, 1994
- B.Sc.(Hons), Microbiology, Monash University, Melbourne, Australia, 1989
Experience
- 2007 - present: Professor, Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia
- 2007 - present: Adjunct Associate Investigator, J. Craig Venter Institute, Rockville, MD, USA
- 2003 - 2007: Associate Investigator, The Institute for Genomic Research, Rockville, MD, USA
- 2000 - 2003: Assistant Investigator, The Institute for Genomic Research, Rockville, MD, USA
- 2000 - 2007: Adjunct Assistant Professor, Johns Hopkins University, Department of Biology, Baltimore, USA
- 1998 - 1999: Assistant Project Scientist, Department of Biology, University of California at San Diego, La Jolla, CA, USA
- 1997 - 1998: C.J. Martin Postdoctoral Fellow, School of Biological Sciences, University of Sydney,Sydney, Australia
- 1995 - 1997: C.J. Martin Postdoctoral Fellow, Department of Biology, University of California at San Diego, La Jolla, CA, USA
Honors/Awards/Societies
- 2007 - present: ISI Highly Cited Author
- 2001 - 2004: Member, Faculty of 1000
- 1995 - 1999: C.J. Martin Fellowship; National Health and Medical Research Council, Australia
- 1990 - 1994: Sir Ernest Fields Memorial Scholarship
I am a Senior Editor for the Journal of Molecular Microbiology and Biotechnology (1999-2011). I have previously served as an Editor for the Journal of Microbial Ecology and the Antonie van Leeuwenhoek Journal of General Microbiology. I am a founding editorial board member for two new journals:
- BMC Microbial Informatics and Experimentation
- Mobile Genetic Elements.
I have been a member of the organizing or scientific committees for various conferences including:
- First Gordon Conference on Multidrug Efflux Pumps (2002)
- Genome Sequencing and Analysis Conference (2001, 2002, 2003)
- Second Florence Conference on Biolog Phenotype Microarrays (2010)
- BacPath (2011)
- Pseudomonas (2011)
- Ninth Annual RECOMB Workshop on Comparative Genomic (2011).
Public Outreach
I have participated in a variety of public outreach activities to foster integration of research and education, and to make scientific research more accessible to the general public:
- Science High Achievers Dinner: a lecture given by myself on the basics of microbial genetics, to a number of talented high school high students, organized by Macquarie University, November 2011.
- Sea of Genes: an exhibition on marine genomics at the Birch Aquarium in La Jolla, California which was organized as part of an NSF-funded sequencing led by myself and Brian Palenik at Scripps Institute of Oceanography.
- Interview on the ABC Science Show: Interview with Robyn Williams on the Enterococcus genome
- Boosting BioControl: Very short interview on MicrobeWorld Radio.
Paulsen lab members
Post-Doctoral Fellow
sasha.tetu@mq.edu.au
ARC Post-Doctoral Fellow
karl.hassan@mq.edu.au
Research Fellow
martin.ostrowski@mq.edu.au
Post-Doctoral Fellow
sophie.mazard@mq.edu.au
ARC Super Science Post-Doctoral Fellow
anahit.penesyan@mq.edu.au
Research Fellow
Bioinformatician
liam.elbourne@mq.edu.au
Research Assistant
EcoCyc curation
amanda.mackie@mq.edu.au
Research Fellow
piklu.roychowdhury@mq.edu.au
PhD Student
prasanth.subramani@mq.edu.au
PhD Student
daniel.farrugia@students.mq.edu.au
PhD Student
liping.li1@students.mq.edu.au
PhD Student
katy.breakwell@students.mq.edu.au
PhD Student
deepa-ruth.varkey@students.mq.edu.au
PhD Student
bhumika.shah@students.mq.edu.au
Honours student
qliu5321@gmail.com
Masters student
sheemal.kumar@students.mq.edu.au
Former lab members
PhD Student
chee.lim@mq.edu.au
Research Fellow
amy.cain@mq.edu.au
Research assistant