Transporter Proteins in Pseudomonas syringae pv. tomato DC3000

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Genome Size (Mb): 6 Total Transporters: 322 No. of Transporters per Mb genome: 53.67 TRANSPORTER TYPE TOTAL PROTEINS (PERCENT) ATP-Dependent 124 (38.5%) Number Percent ABC Family* 119 96% F-ATPase Family* 1 0.8% P-ATPase Family* 4 3.2% Ion Channels 16 (5%) Number Percent Amt Family 1 6.3% MIP Family 1 6.3% MIT Family 4 25% MscL Family 1 6.3% MscS Family 7 43.8% VIC Family 2 12.5% Phosphotransferase System (PTS) 4 (1.2%) Number Percent GPTS Family 2 - SSPTS Family 2 - Secondary Transporter 174 (54%) Number Percent AEC Family 1 0.6% AGCS Family 1 0.6% APC Family 4 2.3% ArAE Family 3 1.7% ArsB Family 1 0.6% BASS Family 1 0.6% BCCT Family 1 0.6% BenE Family 1 0.6% CaCA Family 2 1.1% CDF Family 1 0.6% CitMHS Family 1 0.6% ClC Family 1 0.6% CPA1 Family 3 1.7% CPA2 Family 3 1.7% CPA3 Family 1 0.6% DAACS Family 2 1.1% DMT Family 11 6.3% FNT Family 1 0.6% GntP Family 4 2.3% HAAAP Family 1 0.6% KUP Family 1 0.6% LIVCS Family 1 0.6% LysE Family 1 0.6% MFS Family 71 40.8% MOP Family 6 3.4% MSS Family 2 1.1% NCS1 Family 2 1.1% NCS2 Family 3 1.7% NhaA Family 2 1.1% NRAMP Family 3 1.7% NSS Family 1 0.6% OPT Family 1 0.6% Oxa1 Family 1 0.6% PiT Family 2 1.1% PNaS Family 1 0.6% RhtB Family 7 4% RND Family* 12 6.9% SSS Family 3 1.7% SulP Family 5 2.9% Tat Family* 1 0.6% TDT Family 2 1.1% TRAP-T Family* 1 0.6% Trk Family 1 0.6% TTT Family 1 0.6% Unclassified 1 (0.3%) Number Percent MgtE Family 1 100% * transport proteins functioning as a group are counted once only.

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Copyright © 2002-20013 www.membranetransport.org Last updated Questions may be sent to: Ian T. Paulsen Liam D. H. Elbourne Credits: Principle Investigator: Ian T. Paulsen Database Administrator and Developer: Liam D. H. Elbourne Development Team: Sasha Tetu Karl Hassan Previous Contributors: Qinghu Ren (previous Lead Developer) Katherine H. Kang Kaixi Chen Seth Goldman Joy Garg Jason Tchieu Joan Chen Marek K. Sliwinski Crystal structure adapted from: Dr. Mark Sansom Dr. Da-Neng Wang