Transporter Proteins in

Nocardia farcinica IFM10152


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Genome Size (Mb): 6.29
Total Transporters: 269
No. of Transporters per Mb genome: 42.77

TRANSPORTER TYPE TOTAL PROTEINS (PERCENT)

ATP-Dependent 98 (36.4%)
Number Percent

ABC Family* 83 84.7%

ArsAB Family 4 4.1%

F-ATPase Family* 1 1%

IISP Family 2 2%

P-ATPase Family* 8 8.2%

Ion Channels 10 (3.7%)
Number Percent

Amt Family 2 20%

MIP Family 1 10%

MIT Family 2 20%

MscL Family 1 10%

MscS Family 2 20%

UAC Family 1 10%

VIC Family 1 10%

Phosphotransferase System (PTS) 3 (1.1%)
Number Percent

GPTS Family 2 -

SSPTS Family 1 -

Secondary Transporter 156 (58%)
Number Percent

ACR3 Family 2 1.3%

AGCS Family 1 0.6%

APC Family 11 7.1%

BASS Family 1 0.6%

BCCT Family 1 0.6%

CaCA Family 1 0.6%

CadD Family 1 0.6%

CDF Family 5 3.2%

CPA1 Family 1 0.6%

CPA2 Family 5 3.2%

CPA3 Family 1 0.6%

DAACS Family 1 0.6%

DMT Family 9 5.8%

GPH Family 1 0.6%

LIV-E Family 1 0.6%

LysE Family 1 0.6%

MFS Family 79 50.6%

MOP Family 3 1.9%

NCS1 Family 1 0.6%

NCS2 Family 1 0.6%

NhaA Family 1 0.6%

NiCoT Family 1 0.6%

Oxa1 Family 1 0.6%

PiT Family 1 0.6%

POT Family 1 0.6%

RhtB Family 5 3.2%

RND Family* 10 6.4%

SSS Family 4 2.6%

SulP Family 2 1.3%

Tat Family* 1 0.6%

ThrE Family 1 0.6%

Trk Family 1 0.6%

Unclassified 2 (0.7%)
Number Percent

MgtE Family 2 100%

*transport proteins functioning as a group are counted once only.
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Questions may be sent to: Ian T. Paulsen Liam Elbourne
Credits:
Principal Investigator: Ian T. Paulsen
Database Administrator: Liam Elbourne
Other Contributors: Katherine H. Kang Kaixi Chen Seth Goldman
Joy Garg Jason Tchieu Joan Chen Marek K. Sliwinski
Crystal structure adapted from: Dr. Mark Sansom Dr. Da-Neng Wang