Transporter Proteins in

Lactobacillus acidophilus NCFM


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Genome Size (Mb): 1.99
Total Transporters: 169
No. of Transporters per Mb genome: 84.92

TRANSPORTER TYPE TOTAL PROTEINS (PERCENT)

ATP-Dependent 61 (36.1%)
Number Percent

ABC Family* 48 78.7%

F-ATPase Family* 1 1.6%

IISP Family 2 3.3%

P-ATPase Family* 10 16.4%

Ion Channels 7 (4.1%)
Number Percent

Amt Family 1 14.3%

MIP Family 2 28.6%

MIT Family 1 14.3%

MscL Family 1 14.3%

MscS Family 1 14.3%

VIC Family 1 14.3%

Phosphotransferase System (PTS) 23 (13.6%)
Number Percent

GPTS Family 2 -

SSPTS Family 21 -

Secondary Transporter 77 (45.6%)
Number Percent

AAE Family 1 1.3%

AEC Family 2 2.6%

APC Family 16 20.8%

CadD Family 1 1.3%

CDF Family 1 1.3%

ClC Family 2 2.6%

CPA1 Family 1 1.3%

CPA2 Family 2 2.6%

DASS Family 2 2.6%

DMT Family 5 6.5%

GPH Family 2 2.6%

KUP Family 2 2.6%

LctP Family 1 1.3%

LIVCS Family 3 3.9%

MFS Family 17 22.1%

MOP Family 5 6.5%

NCS2 Family 6 7.8%

NhaC Family 1 1.3%

Oxa1 Family 2 2.6%

POT Family 1 1.3%

RND Family* 1 1.3%

ThrE Family 2 2.6%

Trk Family 1 1.3%

*transport proteins functioning as a group are counted once only.
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Questions may be sent to: Ian T. Paulsen Liam D. H. Elbourne
Credits:
Principle Investigator: Ian T. Paulsen
Database Administrator and Developer: Liam D. H. Elbourne
Development Team: Sasha Tetu Karl Hassan
Previous Contributors: Qinghu Ren (previous Lead Developer) Katherine H. Kang Kaixi Chen Seth Goldman
Joy Garg Jason Tchieu Joan Chen Marek K. Sliwinski
Crystal structure adapted from: Dr. Mark Sansom Dr. Da-Neng Wang