Transporter Proteins in

Dehalococcoides sp. CBDB1


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Genome Size (Mb): 1.4
Total Transporters: 56
No. of Transporters per Mb genome: 40

TRANSPORTER TYPE TOTAL PROTEINS (PERCENT)

ATP-Dependent 26 (46.4%)
Number Percent

ABC Family* 22 84.6%

F-ATPase Family* 1 3.8%

H+-PPase Family 2 7.7%

P-ATPase Family* 1 3.8%

Ion Channels 6 (10.7%)
Number Percent

Amt Family 1 16.7%

MIT Family 2 33.3%

MscL Family 1 16.7%

MscS Family 1 16.7%

VIC Family 1 16.7%

Secondary Transporter 23 (41.1%)
Number Percent

ACR3 Family 1 4.3%

ArsB Family 1 4.3%

CDF Family 2 8.7%

CPA2 Family 2 8.7%

DMT Family 3 13%

MFS Family 6 26.1%

Oxa1 Family 1 4.3%

PiT Family 1 4.3%

RhtB Family 1 4.3%

RND Family* 3 13%

Tat Family* 1 4.3%

Trk Family 1 4.3%

Unclassified 1 (1.8%)
Number Percent

FeoB Family 1 100%

*transport proteins functioning as a group are counted once only.
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Questions may be sent to: Ian T. Paulsen Liam Elbourne
Credits:
Principal Investigator: Ian T. Paulsen
Database Administrator: Liam Elbourne
Other Contributors: Katherine H. Kang Kaixi Chen Seth Goldman
Joy Garg Jason Tchieu Joan Chen Marek K. Sliwinski
Crystal structure adapted from: Dr. Mark Sansom Dr. Da-Neng Wang