Transporter Protein
SPAC823.10c


    Transport Function
Transporter Name: SPAC823.10c
Transporter Type: Secondary Transporter
Transporter Family: MC (TC#: 2.A.29)
The Mitochondrial Carrier (MC) Family
Transporter Subfamily: 
Substrate/Function: ?
TC#: 
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    Genome Locus
PID:   19114749     Blast
Source:   Schizosaccharomyces pombe
Chromosome:   CHR1
Location:   2588422..2589380
Gene:   -
Length:  296
Strand:  -
Code:   -
COG:   -
Product:  mitochondrial carrier protein
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     0
Topology:   >SPAC823.10c
MSEIKKTEKLGVKSSKHLAAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPKMVRRIILHEGGVFSLWKG
TLPSILRSTTGSSCYFYFLNWLRHFAPQSKNIASSHIQNLWMGGFARAAVGFAFMPVTVIKVRYESNLYS
YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSSSVQGTVPHRN
IVNVMSGLISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISST
ITWSVYEWALHRKVIK
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    Sequence
Protein Sequence: >SPAC823.10c 19114749 mitochondrial carrier protein [Schizosaccharomyces pombe ]
MSEIKKTEKLGVKSSKHLAAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPKMVRRIILHEGGVFSLWKG
TLPSILRSTTGSSCYFYFLNWLRHFAPQSKNIASSHIQNLWMGGFARAAVGFAFMPVTVIKVRYESNLYS
YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSSSVQGTVPHRN
IVNVMSGLISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISST
ITWSVYEWALHRKVIK
DNA Sequence: >SPAC823.10c 19114749 mitochondrial carrier protein [Schizosaccharomyces pombe ]
ATGTCAGAAATTAAGAAAACGGAGAAATTGGGTGTAAAAAGCAGTAAACATCTTGCTGCTGGTGCTTTGG
GTGGATTTATTTCCAGTACAACTCTGCAGCCTTTGGATTTGTTGAAAACTCGTTGTCAACAAAGTCAACG
CGACTCCCTTCCTAAAATGGTACGCCGAATAATCCTTCATGAAGGAGGTGTATTTTCTCTGTGGAAGGGT
ACTTTGCCCTCAATTTTAAGGTCTACCACTGGTTCATCTTGTTATTTTTATTTTTTGAACTGGTTAAGAC
ATTTTGCTCCTCAATCAAAAAATATTGCGTCTTCCCATATACAGAATTTGTGGATGGGAGGATTTGCTAG
AGCTGCTGTAGGATTTGCATTTATGCCTGTTACGGTTATAAAAGTTCGTTATGAGAGCAACCTATATTCT
TATACCACCATTTATTCGTCAATTAGGGATATTTGGAAAAAAGAAGGTATATCTGGTTTTTTTAGAGGAT
TTGGAGTCACCGCATTAAGAGATGCACCTCATGCTGGGCTATACGTATATTTTTATGAACTTTCTAAGCA
AAACTTGCATAAACTCTTTGATCGATTCAGTCCATCCTCTTCGGTGCAAGGCACTGTGCCGCATCGCAAT
ATTGTCAATGTAATGTCGGGTCTCATTTCAGGTGCTACTGCAACAGCTATCACAAACCCATTTGATATGC
TCAAAACTCGTGTTCAATTAGAACCTCATATATACAAAAACTTTTTGCATTCTGCAAAACTTGTATATGC
CAATGAAGGATTTAGAGGATTCCTTGATGGATTCTTCCTTCGTGTACTTCGAAAATCTATTTCATCTACA
ATTACTTGGTCTGTTTATGAATGGGCACTTCACCGTAAGGTTATTAAATAA
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    Publications
Publications on this gene:
1.  Yeast 2006 Oct 15; 13(23):913-9.
Gene Ontology annotation status of the fission yeast genome: preliminary coverage approaches 100%.

Aslett M ,Wood V ,

Wellcome Trust Sanger Institute, Cambridge CB10 1HH, UK.

In this review, we present an overview of the Gene Ontology (GO) structure and describe how the GO is implemented for Sz. pombe and made available via Sz. pombe GeneDB (http://www.genedb.org/genedb/pombe/). We give a detailed progress report of Sz. pombe GO annotation, providing the current status of both manual and automatic annotations. Fission yeast has at least one GO annotation for 98.3% of its genes (excluding annotations to 'unknown' terms), greater than the current percentage coverage for any other organism. Approximately 65% (3225 gene products) have at least one annotation to each of the three ontologies (biological process, cellular component and molecular function). Approximately 30% (1443 gene products) have GO terms derived directly from small-scale experiments in fission yeast, supporting the validity of fission yeast as a model eukaryote and a reference organism.

Publication Type: Review;

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    External Links

THE SEEDThe SEED  
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    NBCI Gene Page
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