Transporter Protein
SG1858


    Transport Function
Transporter Name: SG1858
Transporter Type: Ion Channels
Transporter Family: MIP (TC#: 1.A.8)
The Major Intrinsic Protein (MIP) Family
Transporter Subfamily: 
Substrate/Function: glycerol uptake
TC#: 
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    Genome Locus
PID:   85059836     Blast
Source:   Sodalis glossinidius morsitans
Chromosome:   CHR
Location:   3181572..3182471
Gene:   -
Length:  299
Strand:  +
Code:   -
COG:   -
Product:  propanediol diffusion facilitator
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     5
TMS 1:  10-32
TMS 2:  45-67
TMS 3:  87-109
TMS 4:  130-164
TMS 5:  179-198
Topology:   >SG1858
MSKYYESITGLCIAEFMGTGLFIFFGTSVLSAAKVARASFGLWEICVVWGLGIALAVYLTAGISGAHLNP
AVTISLWMFSSFDPQKVVPYIAVQMAGAFCGAALTYLIYHNMFAEYEHAHQMIRGRQDSLFLASIFSTYP
AASISVWLAGLVEIIISSILLGLIMALTDDGNGVPKGPLAPLLIGMLVAVISAANGALDRFCHELSTRLW
SQILHLPQWLGIGCDDGWQRDSLLPGTADCACYRRDPWGSDLSLWYRASFTRSQNRKRGKPYHHLTDNTL
MNAIVLADAPVFWFLCPSH
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    Sequence
Protein Sequence: >SG1858 85059836 propanediol diffusion facilitator [Sodalis glossinidius morsitans]
MSKYYESITGLCIAEFMGTGLFIFFGTSVLSAAKVARASFGLWEICVVWGLGIALAVYLTAGISGAHLNP
AVTISLWMFSSFDPQKVVPYIAVQMAGAFCGAALTYLIYHNMFAEYEHAHQMIRGRQDSLFLASIFSTYP
AASISVWLAGLVEIIISSILLGLIMALTDDGNGVPKGPLAPLLIGMLVAVISAANGALDRFCHELSTRLW
SQILHLPQWLGIGCDDGWQRDSLLPGTADCACYRRDPWGSDLSLWYRASFTRSQNRKRGKPYHHLTDNTL
MNAIVLADAPVFWFLCPSH
DNA Sequence: >SG1858 85059836 propanediol diffusion facilitator [Sodalis glossinidius morsitans]
atgagtaaatattacgaatcgataaccggactttgcattgcagaatttatgggtaccggcttatttattt
ttttcggcaccagcgttctgagtgcggcaaaagtggcgagggccagctttggtctttgggaaatttgcgt
ggtgtgggggctcggcattgcgcttgcggtctacctgacagcaggtatctccggcgctcatcttaatccg
gcggtgacgatatccttatggatgttttccagttttgacccccaaaaagtggtgccctacattgcggtgc
aaatggccggcgcgttttgcggcgcggcattgacctatctgatttaccacaatatgtttgccgagtacga
gcatgctcatcagatgatacgaggccgccaggatagcctgtttctggccagtatattttcaacttatccg
gccgcctccatcagcgtatggctggcgggattagtggaaatcatcatcagctcaattttgctaggactca
tcatggcgctaaccgatgatggtaacggcgttcctaaagggccgcttgcgccccttctgatcggtatgct
ggtggccgttatcagcgcagcaaacggcgcccttgaccggttttgccatgaactcagcacgcgactttgg
tcccaaattcttcaccttcctcaatggctggggatcggttgcgatgacgggtggcagagagattccctac
ttcctggtaccgctgattgcgcctgttatcggcgggatccttggggcagcgatttatcgttatggtatcg
ggcgtcatttacccgcagccaaaacagaaaacgtggtaaaccgtaccaccacctgacagacaacaccttg
atgaacgccatcgtactggctgatgcgccggtgttttggtttctctgcccttcccactga
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    Publications
Publications on this gene:
1.  Genome Res 2006 Feb ; 2(16):149-56.
Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host.

Toh H ,Weiss BL ,Perkin SA ,Yamashita A ,Oshima K ,Hattori M ,Aksoy S ,

Kitasato Institute for Life Sciences, Kitasato University, Sagamihara, Kanagawa 228-0829, Japan.

Sodalis glossinidius is a maternally transmitted endosymbiont of tsetse flies (Glossina spp.), an insect of medical and veterinary significance. Analysis of the complete sequence of Sodalis' chromosome (4,171,146 bp, encoding 2,432 protein coding sequences) indicates a reduced coding capacity of 51%. Furthermore, the chromosome contains 972 pseudogenes, an inordinately high number compared with that of other bacterial species. A high proportion of these pseudogenes are homologs of known proteins that function either in defense or in the transport and metabolism of carbohydrates and inorganic ions, suggesting Sodalis' degenerative adaptations to the immunity and restricted nutritional status of the host. Sodalis possesses three chromosomal symbiosis regions (SSR): SSR-1, SSR-2, and SSR-3, with gene inventories similar to the Type-III secretion system (TTSS) ysa from Yersinia enterolitica and SPI-1 and SPI-2 from Salmonella, respectively. While core components of the needle structure have been conserved, some of the effectors and regulators typically associated with these systems in pathogenic microbes are modified or eliminated in Sodalis. Analysis of SSR-specific invA transcript abundance in Sodalis during host development indicates that the individual symbiosis regions may exhibit different temporal expression profiles. In addition, the Sodalis chromosome encodes a complete flagella structure, key components of which are expressed in immature host developmental stages. These features may be important for the transmission and establishment of symbiont infections in the intra-uterine progeny. The data suggest that Sodalis represents an evolutionary intermediate transitioning from a free-living to a mutualistic lifestyle.

Publication Type: Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.;

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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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