Transporter Protein
SG0411


    Transport Function
Transporter Name: SG0411
Transporter Type: Secondary Transporter
Transporter Family: NhaA (TC#: 2.A.33)
The NhaA Na+:H+ Antiporter (NhaA) Family
Transporter Subfamily: 
Substrate/Function: sodium ion:proton antiporter
TC#: 
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    Genome Locus
PID:   85058389     Blast
Source:   Sodalis glossinidius morsitans
Chromosome:   CHR
Location:   729623..730819
Gene:   -
Length:  398
Strand:  +
Code:   -
COG:   -
Product:  sodium-hydrogen antiporter
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     11
TMS 1:  13-35
TMS 2:  55-77
TMS 3:  94-116
TMS 4:  126-145
TMS 5:  152-174
TMS 6:  178-197
TMS 7:  204-226
TMS 8:  259-281
TMS 9:  288-310
TMS 10:  330-352
TMS 11:  359-381
Topology:   >SG0411
MIAASLRRMITHPAAGGVLLFAAALAAIVMANTDARALYNAIIYFPAQSASATPSHLSLLVLVNDGLMAV
FFLAVGLEVKYELLQGALNSRVRAAFPAIAALGGMVAPAVIYSLMTAGTPALRAGWAIPAATDIAFAVGV
LALLGTRVPVSLKVFMLALAIIDDLGAIVIIALFYNTALEPLALAAAGAVIGIMALMNRANVRFLSLYLL
LGAVLWGCILLSGIHATLAGVVVGGLIPLTLPSTEVSPARALEHWLQPWVVYLILPLFAFANAGISLQGV
APGHLISFLPLGIAAGLVVGKPLGIVLFTAVAVKLRLARLPAGIAFRHIAAAAMLCGIGFTMSIFIANLA
FGHDDPETIVLAKVGILSGSVIAALLGYLLLRAILPQPQGSGSVPVGG
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    Sequence
Protein Sequence: >SG0411 85058389 sodium-hydrogen antiporter [Sodalis glossinidius morsitans]
MIAASLRRMITHPAAGGVLLFAAALAAIVMANTDARALYNAIIYFPAQSASATPSHLSLLVLVNDGLMAV
FFLAVGLEVKYELLQGALNSRVRAAFPAIAALGGMVAPAVIYSLMTAGTPALRAGWAIPAATDIAFAVGV
LALLGTRVPVSLKVFMLALAIIDDLGAIVIIALFYNTALEPLALAAAGAVIGIMALMNRANVRFLSLYLL
LGAVLWGCILLSGIHATLAGVVVGGLIPLTLPSTEVSPARALEHWLQPWVVYLILPLFAFANAGISLQGV
APGHLISFLPLGIAAGLVVGKPLGIVLFTAVAVKLRLARLPAGIAFRHIAAAAMLCGIGFTMSIFIANLA
FGHDDPETIVLAKVGILSGSVIAALLGYLLLRAILPQPQGSGSVPVGG
DNA Sequence: >SG0411 85058389 sodium-hydrogen antiporter [Sodalis glossinidius morsitans]
atgatagctgcgtctttacgccgcatgattacccacccggccgctggtggcgtattgcttttcgccgccg
cgcttgccgctatcgtgatggccaataccgacgcccgcgcgctgtacaacgccatcatttactttccggc
acaatccgctagcgcgacgccttcgcacttgtcattgctggtgctggtcaacgatggcttgatggcggtg
tttttcctggccgtcggtttggaagtcaaatacgaactgctgcagggtgcgctcaatagccgcgtgcggg
cggcctttcccgctattgccgcgctgggtggcatggtggcaccggcggtgatttacagtctgatgaccgc
cgggacgccagcattgcgcgccggatgggcgattccggccgccaccgatattgcctttgccgtcggcgta
ttggccttgctggggacgcgggtgccggtcagcctgaaagttttcatgctggcgctggcgattattgatg
atctgggtgcgatagtgattatcgcgttgttttataacactgcactggagccactggcgctggccgcggc
gggtgccgtgattggaatcatggcgctgatgaatcgcgccaatgttcgttttctatcgctatacctgctg
ttgggggcggtattgtggggctgtattctgctttcgggtatccatgcgacgctcgccggcgtagtggtcg
gggggcttatcccgctcacgctgccctccaccgaagtctccccggcgcgtgcgttggagcactggttgca
gccctgggtggtgtatctgatcctgcccctgttcgccttcgctaacgcggggatttcgctgcaaggtgtg
gcgcccgggcatttgatctccttcttaccgctggggatcgctgccgggttggtggtcggtaaaccgctgg
ggatagtattgtttaccgccgtggcggtgaaactcagactggccaggttgcccgccggcattgctttccg
ccacattgccgcggcggccatgctgtgcggcatcggcttcaccatgtcgatttttatcgccaatctggcg
tttgggcatgatgacccggaaacgattgtgctggcgaaagtcggcattttatccggttcggtgattgcgg
cgctgctgggttacctgctgctgcgcgctatcctgccgcagccgcagggtagcgggtcagtgccggtcgg
gggttaa
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    Publications
Publications on this gene:
1.  Genome Res 2006 Feb ; 2(16):149-56.
Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host.

Toh H ,Weiss BL ,Perkin SA ,Yamashita A ,Oshima K ,Hattori M ,Aksoy S ,

Kitasato Institute for Life Sciences, Kitasato University, Sagamihara, Kanagawa 228-0829, Japan.

Sodalis glossinidius is a maternally transmitted endosymbiont of tsetse flies (Glossina spp.), an insect of medical and veterinary significance. Analysis of the complete sequence of Sodalis' chromosome (4,171,146 bp, encoding 2,432 protein coding sequences) indicates a reduced coding capacity of 51%. Furthermore, the chromosome contains 972 pseudogenes, an inordinately high number compared with that of other bacterial species. A high proportion of these pseudogenes are homologs of known proteins that function either in defense or in the transport and metabolism of carbohydrates and inorganic ions, suggesting Sodalis' degenerative adaptations to the immunity and restricted nutritional status of the host. Sodalis possesses three chromosomal symbiosis regions (SSR): SSR-1, SSR-2, and SSR-3, with gene inventories similar to the Type-III secretion system (TTSS) ysa from Yersinia enterolitica and SPI-1 and SPI-2 from Salmonella, respectively. While core components of the needle structure have been conserved, some of the effectors and regulators typically associated with these systems in pathogenic microbes are modified or eliminated in Sodalis. Analysis of SSR-specific invA transcript abundance in Sodalis during host development indicates that the individual symbiosis regions may exhibit different temporal expression profiles. In addition, the Sodalis chromosome encodes a complete flagella structure, key components of which are expressed in immature host developmental stages. These features may be important for the transmission and establishment of symbiont infections in the intra-uterine progeny. The data suggest that Sodalis represents an evolutionary intermediate transitioning from a free-living to a mutualistic lifestyle.

Publication Type: Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.;

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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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