Transporter Protein
SG0408


    Transport Function
Transporter Name: SG0408
Transporter Type: Secondary Transporter
Transporter Family: AGCS (TC#: 2.A.25)
The Alanine or Glycine:Cation Symporter (AGCS) Family
Transporter Subfamily: 
Substrate/Function: sodium ion:alanine symporter
TC#: 
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    Genome Locus
PID:   85058386     Blast
Source:   Sodalis glossinidius morsitans
Chromosome:   CHR
Location:   721523..723001
Gene:   -
Length:  492
Strand:  -
Code:   -
COG:   -
Product:  alanine-sodium transport protein
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     9
TMS 1:  15-34
TMS 2:  76-98
TMS 3:  137-159
TMS 4:  179-201
TMS 5:  206-225
TMS 6:  301-323
TMS 7:  350-372
TMS 8:  388-410
TMS 9:  415-437
Topology:   >SG0408
MAELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISPFQALCTSLAA
RIGCGNLMGVAIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRDDRGNACGGPAWYMANGLGLR
WMGTLFTLFLLAGYGGFFSAVQANAITLSAQQLSGMGRWPITLALLILSAAAIFGGLRAIARLTQWLVPI
IGIIYLLLAGWVVVHHWRQLATVAALVFNSAFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPN
IAAAAAPWPPHPASQGYIQMLAVFIDTLVICSATAAIILTSGTLEHAHADLHGIALINQALATVTGHWSM
PLLMALVFVFSFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILFGCVAEVSVVWRLADLAMGLM
TITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQESSSTAAPKPL
DR
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    Sequence
Protein Sequence: >SG0408 85058386 alanine-sodium transport protein [Sodalis glossinidius morsitans]
MAELLNFINNLLRDSLLIYLLLGTSIWFTLRTGFIQIRHFCHTFTILKDSGTRGGGGISPFQALCTSLAA
RIGCGNLMGVAIALILGGPGAIFWMWLAALIGMATAFAESTLAQLYKIRDDRGNACGGPAWYMANGLGLR
WMGTLFTLFLLAGYGGFFSAVQANAITLSAQQLSGMGRWPITLALLILSAAAIFGGLRAIARLTQWLVPI
IGIIYLLLAGWVVVHHWRQLATVAALVFNSAFGLPEAASGLVGYGLAQAIFQGVQRGLFSNEAGTGSAPN
IAAAAAPWPPHPASQGYIQMLAVFIDTLVICSATAAIILTSGTLEHAHADLHGIALINQALATVTGHWSM
PLLMALVFVFSFAAIIGNYAYAESSLRFFVLQPMKLKWLLRLLTLTMILFGCVAEVSVVWRLADLAMGLM
TITNLIALLLLSPVVLMLANDYNSQRAIGKLPTFYAVNFPAIAPQLAPDLWGRPTASHQESSSTAAPKPL
DR
DNA Sequence: >SG0408 85058386 alanine-sodium transport protein [Sodalis glossinidius morsitans]
atggctgagctattgaattttatcaataacctgttacgggattcactcttaatttatctgctgttgggaa
ccagcatctggtttacgctacgcaccggctttatccagatacgccatttctgccataccttcacgattct
caaagactcagggacgcgcggcggcggcggtatttcaccgtttcaggccttatgcacctcccttgccgcc
cgtatcggctgcggtaacctgatgggcgtcgccatcgcgctgatcctgggcggaccgggcgccattttct
ggatgtggctggcggcgttgattggcatggcgaccgcctttgcggaaagcaccctggcgcagctgtacaa
aatacgtgatgaccgcggcaacgcctgcggcgggccggcttggtatatggccaacggactcggtttgcgc
tggatgggcacgttattcaccctctttctgttggcgggctatggcggttttttcagcgccgttcaggcca
acgcgattacgctgtccgcgcagcagctgtccggcatgggccgctggccgataaccctggctctgcttat
cctgagtgccgcggccattttcggcggtcttcgcgccatcgcccgcctgacccaatggctggtgcctata
ataggtattatatacttactactggcaggttgggtggtcgtgcatcactggcgccagctcgcgacggtcg
ccgccctggtgttcaacagcgcctttggcctgccggaagccgcctcggggctggtcggctatggcctggc
gcaggcgattttccaaggggtacagcgcggtttgttctcaaacgaggcgggcactggctcggcgccgaat
atcgccgccgccgccgcgccctggccgccgcaccctgcctcgcaaggctatattcagatgttggcggtgt
tcatcgataccctggttatctgcagcgccacggccgcaatcatcctcacctccggcacgctggagcatgc
tcatgccgatctccacggcatcgcgctgattaatcaagcgctggccacggtgaccggtcactggagcatg
ccgctactcatggcgttggtgtttgtgttctccttcgccgccatcattggcaattacgcctatgcggaaa
gcagcctgcgttttttcgtgctgcagccaatgaagctgaaatggctgctgcgtctgctgacgctgaccat
gatactgtttggctgcgtagcggaagtctcggtggtctggagactggcggacctggcgatgggcctgatg
acgataaccaacttgatcgcccttttattgctgtcgccggtcgtgttgatgctggccaatgattacaata
gccagcgcgccatcgggaaactaccgacattttatgcggtaaacttcccggctatcgcaccgcagttggc
gccggatctgtggggacggccgaccgcgtcacaccaggaaagcagcagcacggcagcgcccaaacccctt
gaccgttaa
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    Publications
Publications on this gene:
1.  Genome Res 2006 Feb ; 2(16):149-56.
Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host.

Toh H ,Weiss BL ,Perkin SA ,Yamashita A ,Oshima K ,Hattori M ,Aksoy S ,

Kitasato Institute for Life Sciences, Kitasato University, Sagamihara, Kanagawa 228-0829, Japan.

Sodalis glossinidius is a maternally transmitted endosymbiont of tsetse flies (Glossina spp.), an insect of medical and veterinary significance. Analysis of the complete sequence of Sodalis' chromosome (4,171,146 bp, encoding 2,432 protein coding sequences) indicates a reduced coding capacity of 51%. Furthermore, the chromosome contains 972 pseudogenes, an inordinately high number compared with that of other bacterial species. A high proportion of these pseudogenes are homologs of known proteins that function either in defense or in the transport and metabolism of carbohydrates and inorganic ions, suggesting Sodalis' degenerative adaptations to the immunity and restricted nutritional status of the host. Sodalis possesses three chromosomal symbiosis regions (SSR): SSR-1, SSR-2, and SSR-3, with gene inventories similar to the Type-III secretion system (TTSS) ysa from Yersinia enterolitica and SPI-1 and SPI-2 from Salmonella, respectively. While core components of the needle structure have been conserved, some of the effectors and regulators typically associated with these systems in pathogenic microbes are modified or eliminated in Sodalis. Analysis of SSR-specific invA transcript abundance in Sodalis during host development indicates that the individual symbiosis regions may exhibit different temporal expression profiles. In addition, the Sodalis chromosome encodes a complete flagella structure, key components of which are expressed in immature host developmental stages. These features may be important for the transmission and establishment of symbiont infections in the intra-uterine progeny. The data suggest that Sodalis represents an evolutionary intermediate transitioning from a free-living to a mutualistic lifestyle.

Publication Type: Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.;

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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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