Transporter Protein
PSPTO5340


    Transport Function
Transporter Name: PSPTO5340
Transporter Type: Secondary Transporter
Transporter Family: MFS (TC#: 2.A.1)
The Major Facilitator Superfamily (MFS)
Transporter Subfamily: 
Substrate/Function: oxalate/formate
TC#: 
^ Return to the top ^

    Genome Locus
PID:   28872452     Blast
Source:   Pseudomonas syringae pv. tomato DC3000
Chromosome:   -
Location:   6068635..6070296
Gene:   -
Length:  553
Strand:  -
Code:   -
COG:   -
Product:  MFS permease-like protein
^ Return to the top ^

    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     13
TMS 1:  31-53
TMS 2:  91-113
TMS 3:  126-148
TMS 4:  153-175
TMS 5:  182-204
TMS 6:  214-236
TMS 7:  280-302
TMS 8:  328-350
TMS 9:  363-385
TMS 10:  389-411
TMS 11:  423-445
TMS 12:  460-482
TMS 13:  526-545
Topology:   >PSPTO5340
MSTSTALGGEAAQPAFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKAVGVTAPVACT
PDMGFFAQMFASTCDWQISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGI
YTHQIWLMWLGSGVIGGIGLGLGYISPVSTLIKWFPDKRGMATGMAIMGFGGGAMVGAPLATALMGHFAS
AEGVGVWQSFVVMAVIYFIFMIGGALGYRVPPTGWKPEGWTAPAAKAKNSMITNRHVHVSVAWKTPQFRL
VWLVLCLNVSAGIGILGMASPLLQEVFAGKLLGNDLTFSELNADQLKAIAAIAAGFTGLLSLFNIGGRFF
WASCSDYIGRKATYFVFFALGFLLYASVPTLGHMGSIALFVAAFCVVLSMYGGGFATVPAYLADLFGTQM
VGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSHGVARADAYNITLYILAGLLVLGFICNLLIRPVADKYF
MTDAELAAEQAIGRDKGASAATSLEWKASSSSKPLVIAAWLAVGIPLAWGVWITLQKTAVLFH
^ Return to the top ^

    Sequence
Protein Sequence: >PSPTO5340 28872452 MFS permease-like protein [Pseudomonas syringae pv. tomato DC3000]
MSTSTALGGEAAQPAFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKAVGVTAPVACT
PDMGFFAQMFASTCDWQISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGI
YTHQIWLMWLGSGVIGGIGLGLGYISPVSTLIKWFPDKRGMATGMAIMGFGGGAMVGAPLATALMGHFAS
AEGVGVWQSFVVMAVIYFIFMIGGALGYRVPPTGWKPEGWTAPAAKAKNSMITNRHVHVSVAWKTPQFRL
VWLVLCLNVSAGIGILGMASPLLQEVFAGKLLGNDLTFSELNADQLKAIAAIAAGFTGLLSLFNIGGRFF
WASCSDYIGRKATYFVFFALGFLLYASVPTLGHMGSIALFVAAFCVVLSMYGGGFATVPAYLADLFGTQM
VGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSHGVARADAYNITLYILAGLLVLGFICNLLIRPVADKYF
MTDAELAAEQAIGRDKGASAATSLEWKASSSSKPLVIAAWLAVGIPLAWGVWITLQKTAVLFH
DNA Sequence: >PSPTO5340 28872452 MFS permease-like protein [Pseudomonas syringae pv. tomato DC3000]
ATGAGCACAAGTACAGCCTTGGGCGGCGAAGCCGCTCAGCCTGCGTTCTTGTCCAAAGAGCGCATTATCG
CCAAGCCCGGTTTCAACCGTTGGCTTGTTCCACCAGCAGCATTGGCAATCCATCTTTGCATCGGCATGGC
TTATGGCTTCTCGGTGTTCTGGTTGCCACTGTCGAAGGCAGTCGGTGTCACTGCACCTGTTGCTTGCACT
CCGGACATGGGTTTCTTCGCGCAGATGTTCGCGTCGACCTGTGACTGGCAGATCTCCATGCTGGGCTGGA
TCTACACGCTGTTCTTCATCTTCCTGGGCTGCTCGGCTGCCATCTGGGGTGGCTGGCTGGAGCACGCAGG
TCCACGCAAGGCAGGTGTTGTTTCGGCACTGTGCTGGTGTGGCGGTCTGCTGATTTCCGCGCTGGGTATC
TACACGCACCAGATCTGGCTGATGTGGCTGGGCTCGGGCGTGATCGGCGGTATCGGTCTGGGGTTGGGCT
ATATCTCCCCGGTATCCACCCTGATCAAGTGGTTCCCGGACAAACGCGGCATGGCGACCGGCATGGCGAT
CATGGGCTTTGGTGGCGGCGCGATGGTGGGCGCACCCCTGGCCACTGCGTTGATGGGCCACTTCGCTTCG
GCTGAGGGCGTGGGCGTCTGGCAGAGCTTCGTGGTGATGGCGGTGATTTACTTCATCTTCATGATCGGCG
GCGCGCTGGGCTATCGTGTTCCGCCAACTGGCTGGAAACCTGAGGGCTGGACTGCTCCGGCTGCCAAGGC
CAAGAACTCGATGATCACCAACCGTCACGTGCACGTCAGCGTGGCCTGGAAAACACCGCAATTCCGTCTG
GTCTGGCTGGTGCTGTGCCTTAACGTGTCGGCCGGTATCGGTATCCTGGGCATGGCTTCGCCACTGTTGC
AGGAAGTGTTCGCCGGCAAACTGCTGGGCAACGATCTGACATTCAGCGAACTCAATGCTGATCAACTGAA
GGCCATTGCTGCCATTGCAGCCGGCTTCACCGGTCTGTTGAGCCTGTTCAACATTGGCGGTCGTTTCTTC
TGGGCGTCGTGCTCGGACTACATTGGCCGTAAAGCGACTTACTTTGTGTTCTTCGCGCTGGGCTTCCTGC
TTTACGCTTCGGTTCCGACACTGGGTCATATGGGCAGCATTGCGCTGTTCGTAGCGGCTTTCTGTGTGGT
GCTGTCGATGTACGGTGGCGGTTTCGCGACGGTTCCGGCCTATCTGGCTGACTTGTTCGGTACGCAGATG
GTGGGTGCGATCCACGGTCGTCTGCTGACTGCATGGGCTGCGGCAGGTGTGCTGGGTCCGGTATTGGTCA
ACTACCTGCGCGAGTATCAACTCAGCCACGGTGTTGCGCGTGCCGATGCCTACAACATCACCTTGTACAT
CCTCGCGGGTCTGCTGGTGCTGGGCTTTATCTGCAACCTGCTGATTCGTCCGGTTGCCGACAAGTACTTC
ATGACCGACGCCGAACTGGCTGCTGAACAGGCCATTGGTCGCGACAAGGGCGCTAGCGCCGCTACTTCGC
TGGAGTGGAAAGCATCCTCCTCCAGCAAGCCGCTGGTGATCGCTGCCTGGCTGGCGGTCGGCATCCCGCT
GGCATGGGGCGTCTGGATTACCCTGCAAAAGACCGCAGTGCTGTTTCACTAA
^ Return to the top ^

    Publications
Publications on this gene:
N/A
^ Return to the top ^

    External Links

   TIGR CMRTHE SEEDThe SEED  
^ Return to the top ^

    NBCI Gene Page
^ Return to the top ^