Transporter Protein
DP0964


    Transport Function
Transporter Name: DP0964
Transporter Type: Secondary Transporter
Transporter Family: BCCT (TC#: 2.A.15)
The Betaine/Carnitine/Choline Transporter (BCCT) Family
Transporter Subfamily: 
Substrate/Function: glycine betaine/carnitine/choline
TC#: 
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    Genome Locus
PID:   51244816     Blast
Source:   Desulfotalea psychrophila LSv54
Chromosome:   CHR
Location:   1078218..1079909
Gene:   -
Length:  563
Strand:  +
Code:   -
COG:   -
Product:  probable glycine-betaine transporter (OpuD)
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     12
TMS 1:  67-89
TMS 2:  111-133
TMS 3:  146-168
TMS 4:  206-225
TMS 5:  245-267
TMS 6:  290-312
TMS 7:  319-341
TMS 8:  372-394
TMS 9:  406-428
TMS 10:  456-478
TMS 11:  505-524
TMS 12:  534-556
Topology:   >DP0964
MQENVNCCRLVPSHDALRGPFGGDVFSAWALYYQDGGYMKQGRGKYSIDTTDYTIGQDNIQKWGFDVHNI
VFGVSAGLILLFLLATLFSDPHTAKMALDGVKWKIIANFDLLFIWSVNIFVLFCLGLIVSPYGKIRLGGD
DAVPDYSVCSWLAMLFAAGMAIGLMFWSVAEPVAYFTGWYKTPLNVVPNSPEAARLAMGATMFHWGLHPW
ATYAVVGLSLAYFTYNKGLPLSIRSIFYPILGERAWGWAGHIVDILAVLATLFGLATSLGLGAQQAASGI
NNVFGLENTIGLQIGVICGVTLLATISVVRGIEGGVKVLSNINMIIAFFLLVAVIVLGGGVVLKSLPTTM
GAYLENIIPLSNPHGREDQAWFQGWTVFYWAWWISWSPCVGMFIARVSKGRTIRQFLIAVLIVPTLVTFV
WMSTFGGIAIDQVVRGVGALGTEGLKSVPLAMFQMFDVLPFSNFLSIIGIILVLVFFITSSDSASLVIDS
ITAGGKVEAPVPQRVFWALTEGAIAAALLWVGGTEAIQALQAGAICTALPFTVIILFMCLSLILGLRTEP
RKL
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    Sequence
Protein Sequence: >DP0964 51244816 probable glycine-betaine transporter (OpuD) [Desulfotalea psychrophila LSv54]
MQENVNCCRLVPSHDALRGPFGGDVFSAWALYYQDGGYMKQGRGKYSIDTTDYTIGQDNIQKWGFDVHNI
VFGVSAGLILLFLLATLFSDPHTAKMALDGVKWKIIANFDLLFIWSVNIFVLFCLGLIVSPYGKIRLGGD
DAVPDYSVCSWLAMLFAAGMAIGLMFWSVAEPVAYFTGWYKTPLNVVPNSPEAARLAMGATMFHWGLHPW
ATYAVVGLSLAYFTYNKGLPLSIRSIFYPILGERAWGWAGHIVDILAVLATLFGLATSLGLGAQQAASGI
NNVFGLENTIGLQIGVICGVTLLATISVVRGIEGGVKVLSNINMIIAFFLLVAVIVLGGGVVLKSLPTTM
GAYLENIIPLSNPHGREDQAWFQGWTVFYWAWWISWSPCVGMFIARVSKGRTIRQFLIAVLIVPTLVTFV
WMSTFGGIAIDQVVRGVGALGTEGLKSVPLAMFQMFDVLPFSNFLSIIGIILVLVFFITSSDSASLVIDS
ITAGGKVEAPVPQRVFWALTEGAIAAALLWVGGTEAIQALQAGAICTALPFTVIILFMCLSLILGLRTEP
RKL
DNA Sequence: >DP0964 51244816 probable glycine-betaine transporter (OpuD) [Desulfotalea psychrophila LSv54]
TTGCAAGAAAACGTTAATTGTTGTAGACTCGTGCCCTCACATGATGCACTCAGGGGGCCTTTTGGAGGAG
ATGTTTTTTCTGCTTGGGCCCTTTATTACCAAGATGGAGGATACATGAAACAGGGTAGAGGGAAGTACAG
TATTGATACAACAGACTATACCATTGGTCAGGACAACATCCAGAAATGGGGATTTGATGTTCATAATATC
GTTTTTGGCGTAAGTGCCGGTTTGATCCTATTGTTTTTGCTTGCCACACTTTTCAGCGATCCACATACTG
CAAAGATGGCGCTAGATGGTGTTAAGTGGAAGATCATAGCGAACTTTGATCTGCTATTTATCTGGTCGGT
AAATATTTTTGTCCTGTTTTGCCTTGGTCTTATTGTCTCGCCCTATGGGAAAATCCGCCTAGGTGGGGAT
GATGCTGTGCCTGATTACTCTGTCTGTTCCTGGTTGGCTATGCTTTTTGCCGCTGGCATGGCCATTGGTC
TTATGTTTTGGAGTGTTGCAGAACCTGTTGCTTACTTTACCGGTTGGTATAAGACACCCCTGAATGTGGT
GCCTAATTCGCCTGAGGCTGCCCGCCTTGCCATGGGTGCCACTATGTTTCATTGGGGACTTCACCCCTGG
GCCACCTATGCCGTTGTCGGTCTCTCCCTTGCCTATTTTACCTATAATAAGGGCTTGCCTCTCTCCATTC
GTTCCATCTTTTATCCTATTTTGGGAGAGCGTGCCTGGGGTTGGGCTGGTCATATTGTTGATATTCTCGC
TGTTTTGGCAACCCTCTTTGGTCTTGCTACATCTCTGGGGCTGGGTGCCCAGCAGGCAGCAAGTGGAATT
AACAATGTCTTTGGTTTAGAGAACACCATTGGCCTGCAAATTGGTGTTATTTGTGGTGTTACCTTGCTGG
CGACAATATCTGTTGTCCGGGGTATCGAGGGTGGCGTTAAGGTTTTAAGTAATATCAACATGATAATTGC
TTTTTTCTTGCTTGTGGCAGTGATTGTTTTGGGTGGTGGTGTTGTTTTAAAGTCTCTGCCAACAACCATG
GGTGCCTATCTGGAAAATATTATTCCACTCAGTAATCCGCACGGTCGTGAAGATCAGGCTTGGTTTCAGG
GTTGGACTGTTTTTTACTGGGCCTGGTGGATCTCTTGGTCACCATGTGTGGGGATGTTTATTGCGCGGGT
CTCCAAGGGGCGAACAATTCGTCAGTTCCTTATAGCAGTACTTATTGTCCCTACTCTCGTAACCTTTGTC
TGGATGTCGACCTTTGGCGGAATAGCCATTGATCAGGTGGTTAGAGGTGTGGGAGCTTTGGGCACAGAAG
GTTTAAAGAGTGTTCCCTTGGCAATGTTTCAGATGTTTGATGTCCTGCCCTTTAGTAACTTTCTCTCCAT
CATAGGTATTATTCTGGTTCTGGTCTTTTTTATTACCTCGTCGGATTCCGCCTCTCTGGTCATTGATAGC
ATTACAGCAGGGGGTAAGGTGGAAGCCCCGGTCCCACAGCGAGTTTTTTGGGCCTTAACCGAGGGCGCTA
TTGCTGCAGCTCTGCTCTGGGTTGGTGGCACGGAGGCGATTCAAGCCCTGCAGGCAGGGGCAATTTGCAC
TGCCCTGCCCTTCACCGTGATCATTTTATTTATGTGTTTGAGTTTGATTTTAGGACTTCGGACAGAACCG
AGAAAACTGTAA
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    Publications
Publications on this gene:
N/A
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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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