Transporter Protein
AZC_2978


    Transport Function
Transporter Name: AZC_2978
Transporter Type: Secondary Transporter
Transporter Family: MFS (TC#: 2.A.1)
The Major Facilitator Superfamily (MFS)
Transporter Subfamily: 
Substrate/Function: multidrug efflux
TC#: 
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    Genome Locus
PID:   158424602     Blast
Source:   Azorhizobium caulinodans ORS 571
Chromosome:   CHR
Location:   3403147..3404499
Gene:   -
Length:  450
Strand:  +
Code:   -
COG:   -
Product:  general substrate transporter
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     12
TMS 1:  38-60
TMS 2:  70-92
TMS 3:  104-126
TMS 4:  136-158
TMS 5:  179-198
TMS 6:  203-222
TMS 7:  254-276
TMS 8:  291-313
TMS 9:  320-342
TMS 10:  352-372
TMS 11:  385-407
TMS 12:  417-436
Topology:   >AZC_2978
MCAIVPPIFRPERPPMPAPQPQAAPSSKAMTVLRVTSGNFLEMFDFFLFGFYATHIAHAFFPVSDAYASL
MLTFGTFGAGFLMRPLGAIILGAYVDRLGRRQGLILTLGIMSLGTVLIAFVPGYATIGMAAPLLVLLGRL
LQGFSAGVELGGVSVYLAEIATPGNKGFYVSWQSGSQQVAIIVAALLGYALNAWMAPQAVSDWAWRIPFF
IGCLIVPLLFLLRRSLEETEEFLARKHRPELGEMFRTIAGNWKIVLAGMMLVVMTTVSFYMITVYTPTFG
RAVLKLSQTDALLVTLCVGISNFFWLPVMGALSDRIGRKPILIIFTALTLLTAYPALAWLVANVTFGKML
AVELWLSFLYASYNGAMVVALTEVMPAHVRTTGFSLAYSLATALFGGFTPAVSTWLIEQTGDKAAPGYWL
IFAGACGLIATFILYGRQGAMVAKPAVRTN
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    Sequence
Protein Sequence: >AZC_2978 158424602 general substrate transporter [Azorhizobium caulinodans ORS 571]
MCAIVPPIFRPERPPMPAPQPQAAPSSKAMTVLRVTSGNFLEMFDFFLFGFYATHIAHAFFPVSDAYASL
MLTFGTFGAGFLMRPLGAIILGAYVDRLGRRQGLILTLGIMSLGTVLIAFVPGYATIGMAAPLLVLLGRL
LQGFSAGVELGGVSVYLAEIATPGNKGFYVSWQSGSQQVAIIVAALLGYALNAWMAPQAVSDWAWRIPFF
IGCLIVPLLFLLRRSLEETEEFLARKHRPELGEMFRTIAGNWKIVLAGMMLVVMTTVSFYMITVYTPTFG
RAVLKLSQTDALLVTLCVGISNFFWLPVMGALSDRIGRKPILIIFTALTLLTAYPALAWLVANVTFGKML
AVELWLSFLYASYNGAMVVALTEVMPAHVRTTGFSLAYSLATALFGGFTPAVSTWLIEQTGDKAAPGYWL
IFAGACGLIATFILYGRQGAMVAKPAVRTN
DNA Sequence: >AZC_2978 158424602 general substrate transporter [Azorhizobium caulinodans ORS 571]
ttgtgcgccatagtgccgcccatttttcgacccgagaggcccccaatgcccgccccgcagcctcaggcag
cgccctcctccaaggccatgacagtgctccgcgtcaccagcggcaacttcctggagatgttcgatttctt
cctgttcggattctatgcgacgcacatcgcgcacgccttctttccggtcagtgatgcctatgcctcgctc
atgctgaccttcggcaccttcggcgccggctttctcatgcggcccttaggggcgatcattctcggcgctt
atgtggaccgcctcggccgccggcagggtctgatcctcacgctcggcatcatgtcgctgggcaccgtcct
catcgccttcgtgcccggctatgccaccatcggcatggccgcgccgcttctggtgctgctcggccggctg
cttcagggcttttccgcgggcgtggaactgggcggcgtctccgtctatctcgcggagatcgcgacgcccg
ggaacaagggcttctatgtcagctggcagtcgggcagccagcaggtggcgatcatcgtggctgccctcct
cggctatgccctcaatgcctggatggcgccgcaggccgtctccgactgggcgtggcgcattcccttcttc
atcggctgtctcatcgtgcccctgctgttcctcctgcgtcgctcgctcgaggagacggaggagttcctcg
cccgcaagcatcgccccgagcttggggagatgttccgcaccatcgccggcaactggaagatcgttctggc
gggcatgatgctggtggtgatgaccaccgtgtccttctacatgatcaccgtctacactccgaccttcggg
cgggcagtgctcaagctctcccagacagacgcgctgctggtgacgctgtgcgtcggcatttccaacttct
tctggctgcccgtcatgggtgctctgtcggatcgcatcggccgcaagccgatcctcatcatcttcaccgc
cctgacgctgctcaccgcctatcccgcgctcgcgtggctggtggccaacgtcaccttcggcaagatgctg
gcggtcgaactctggctgtccttcctctacgccagctacaacggcgcgatggtggtggcgctcaccgagg
tgatgccggcgcatgtgcgcaccacaggcttctcgctcgcctacagcctcgccacggcgctgttcggcgg
cttcacgccggcggtgtccacctggcttatcgagcagacgggcgacaaggccgcgccgggctactggctg
atcttcgccggcgcctgcggcctcatcgccaccttcatcctctacgggcgccagggcgccatggtggcaa
agcccgccgtgcggacgaactga
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    Publications
Publications on this gene:
1.  Appl Environ Microbiol 2007 Oct ; 20(73):6650-9.
Rhizobial factors required for stem nodule maturation and maintenance in Sesbania rostrata-Azorhizobium caulinodans ORS571 symbiosis.

Suzuki S ,Aono T ,Lee KB ,Suzuki T ,Liu CT ,Miwa H ,Wakao S ,Iki T ,Oyaizu H ,

Biotechnology Research Center, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

The molecular and physiological mechanisms behind the maturation and maintenance of N(2)-fixing nodules during development of symbiosis between rhizobia and legumes still remain unclear, although the early events of symbiosis are relatively well understood. Azorhizobium caulinodans ORS571 is a microsymbiont of the tropical legume Sesbania rostrata, forming N(2)-fixing nodules not only on the roots but also on the stems. In this study, 10,080 transposon-inserted mutants of A. caulinodans ORS571 were individually inoculated onto the stems of S. rostrata, and those mutants that induced ineffective stem nodules, as displayed by halted development at various stages, were selected. From repeated observations on stem nodulation, 108 Tn5 mutants were selected and categorized into seven nodulation types based on size and N(2) fixation activity. Tn5 insertions of some mutants were found in the well-known nodulation, nitrogen fixation, and symbiosis-related genes, such as nod, nif, and fix, respectively, lipopolysaccharide synthesis-related genes, C(4) metabolism-related genes, and so on. However, other genes have not been reported to have roles in legume-rhizobium symbiosis. The list of newly identified symbiosis-related genes will present clues to aid in understanding the maturation and maintenance mechanisms of nodules.

Publication Type: Research Support, Non-U.S. Gov't;

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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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