Transporter Protein
AZC_0571


    Transport Function
Transporter Name: AZC_0571
Transporter Type: Secondary Transporter
Transporter Family: MFS (TC#: 2.A.1)
The Major Facilitator Superfamily (MFS)
Transporter Subfamily: 
Substrate/Function: muropeptide (AmpG)
TC#: 
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    Genome Locus
PID:   158422195     Blast
Source:   Azorhizobium caulinodans ORS 571
Chromosome:   CHR
Location:   632348..633760
Gene:   -
Length:  470
Strand:  -
Code:   -
COG:   -
Product:  major facilitator
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    Transmembrane Segment
TMSs: 
TMHMM Server 
Total:     12
TMS 1:  38-60
TMS 2:  70-89
TMS 3:  110-129
TMS 4:  144-166
TMS 5:  186-208
TMS 6:  218-240
TMS 7:  282-304
TMS 8:  314-336
TMS 9:  343-365
TMS 10:  375-397
TMS 11:  409-431
TMS 12:  435-457
Topology:   >AZC_0571
MSSRPPPTEQDMSENTLEAPGAPASMLDAVKVYLRPSVLVVILLGFSSGLPLALTGTTLAVWMTERKVDI
ATIGLFHLVGLPYTLKFLWAPLVDALDVPLLSRWLGRRRGWLLATQLLLAAAILYLGFQDLGFAPSADGT
RMAAPFGLIVGAVLVAFLSATQDIVVDAYRVEKLDTSEQAAGMAGYVAAYRIGMLVSGAGIIALVAWFEF
KGLPHAQVWAWGYGVAAACMALGIFATLIAREPDGAPRVAHEGGALGALKRVFTTAFGAFSEFLTRSHAF
AILAFVTLYKFSDALAGGLTASFVISIGFDKATYAAIVKGVGLLAALAGGFAGGMLARGRSLVTCLWIGG
VLQMASNLAFSVQAMIGPDVGFLTFAMIVENFTGAIGTVIFVAYLSSLCGARAHTATQYALLTALTAVGR
TVLASGGGYIYDVTGWAWFFVVTVIAGLPGLALLGWLQARGHFRELGAKG
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    Sequence
Protein Sequence: >AZC_0571 158422195 major facilitator [Azorhizobium caulinodans ORS 571]
MSSRPPPTEQDMSENTLEAPGAPASMLDAVKVYLRPSVLVVILLGFSSGLPLALTGTTLAVWMTERKVDI
ATIGLFHLVGLPYTLKFLWAPLVDALDVPLLSRWLGRRRGWLLATQLLLAAAILYLGFQDLGFAPSADGT
RMAAPFGLIVGAVLVAFLSATQDIVVDAYRVEKLDTSEQAAGMAGYVAAYRIGMLVSGAGIIALVAWFEF
KGLPHAQVWAWGYGVAAACMALGIFATLIAREPDGAPRVAHEGGALGALKRVFTTAFGAFSEFLTRSHAF
AILAFVTLYKFSDALAGGLTASFVISIGFDKATYAAIVKGVGLLAALAGGFAGGMLARGRSLVTCLWIGG
VLQMASNLAFSVQAMIGPDVGFLTFAMIVENFTGAIGTVIFVAYLSSLCGARAHTATQYALLTALTAVGR
TVLASGGGYIYDVTGWAWFFVVTVIAGLPGLALLGWLQARGHFRELGAKG
DNA Sequence: >AZC_0571 158422195 major facilitator [Azorhizobium caulinodans ORS 571]
gtgtcgagccgcccgccgcccacggaacaggacatgagcgagaacaccctcgaagccccgggcgcccccg
cgtcgatgctcgatgccgtgaaggtctatctgcgcccgagcgtgctggtggtgatcctgctcggcttctc
ctcgggcctgccgctggcgctcaccggcaccacgctcgcggtctggatgaccgagcgcaaggtggacatc
gccaccatcggcctcttccatctggtcggcctgccctacacgctgaagttcctctgggcgccactggtgg
atgccctcgacgtgccgctgctctcccgctggctcggccggcggcgcggctggctgctggccacgcagct
gctgctcgccgccgccattctctatctgggctttcaggatctcggctttgccccttccgccgacggcacc
cgcatggcggcgcccttcgggctcatcgtcggagcggtgctggtggccttcctctccgccacacaggaca
tcgtggtggatgcctatcgcgtggagaagctcgacacctccgagcaggcggccggcatggccggctatgt
ggcagcctatcgcatcggcatgctggtgtccggcgccggcatcattgccctcgtggcgtggttcgagttc
aagggcctgccgcacgcgcaggtgtgggcctggggctatggcgtcgctgccgcctgcatggcgctcggca
tcttcgcgaccctcatcgcccgcgagccggacggcgcaccgcgggtcgcccatgagggcggggcgctcgg
cgccctgaagcgggtcttcaccaccgccttcggcgccttctccgagttcctgacccggagccacgccttc
gccatcctcgccttcgtcaccctctacaaattctccgatgcgctggcgggcgggctcaccgcgtccttcg
tcatctccatcggcttcgacaaggcgacctacgccgccatcgtgaagggcgtcggcctcctcgcggccct
ggcgggcggctttgccggcggcatgctggcgcgggggcgctcgctggtcacgtgcctctggatcggcggc
gtgctccagatggcctccaacctcgccttctccgttcaggcgatgatcgggcccgacgtgggcttcctca
ccttcgcgatgatcgtcgagaacttcaccggcgccatcggcacggtgatcttcgtcgcctatctctcgtc
cctgtgcggcgctcgcgcacacacggccacccaatatgccctgctgaccgcgctcaccgccgtcggccgc
accgtcctcgcctcgggcggcggctatatctatgacgtgaccggctgggcgtggttcttcgtcgtcacgg
tcatcgccggcctgccgggtctcgccctgctcggctggcttcaggcgcgcggccacttccgggagcttgg
ggcaaaggggtga
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    Publications
Publications on this gene:
1.  Appl Environ Microbiol 2007 Oct ; 20(73):6650-9.
Rhizobial factors required for stem nodule maturation and maintenance in Sesbania rostrata-Azorhizobium caulinodans ORS571 symbiosis.

Suzuki S ,Aono T ,Lee KB ,Suzuki T ,Liu CT ,Miwa H ,Wakao S ,Iki T ,Oyaizu H ,

Biotechnology Research Center, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

The molecular and physiological mechanisms behind the maturation and maintenance of N(2)-fixing nodules during development of symbiosis between rhizobia and legumes still remain unclear, although the early events of symbiosis are relatively well understood. Azorhizobium caulinodans ORS571 is a microsymbiont of the tropical legume Sesbania rostrata, forming N(2)-fixing nodules not only on the roots but also on the stems. In this study, 10,080 transposon-inserted mutants of A. caulinodans ORS571 were individually inoculated onto the stems of S. rostrata, and those mutants that induced ineffective stem nodules, as displayed by halted development at various stages, were selected. From repeated observations on stem nodulation, 108 Tn5 mutants were selected and categorized into seven nodulation types based on size and N(2) fixation activity. Tn5 insertions of some mutants were found in the well-known nodulation, nitrogen fixation, and symbiosis-related genes, such as nod, nif, and fix, respectively, lipopolysaccharide synthesis-related genes, C(4) metabolism-related genes, and so on. However, other genes have not been reported to have roles in legume-rhizobium symbiosis. The list of newly identified symbiosis-related genes will present clues to aid in understanding the maturation and maintenance mechanisms of nodules.

Publication Type: Research Support, Non-U.S. Gov't;

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    External Links

   TIGR CMRTHE SEEDThe SEED  
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    NBCI Gene Page
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