Transporter Proteins in

Pseudomonas syringae pv. tomato DC3000


Confidence Level of Functional Assignments:
weak Weak Bioinformatic Evidence strong Strong Bioinformatic Evidence orthologue Clear Orthologue to Experimentally Characterized experimental Experimental Characterized
TMS Transmebrane Segments (TMS); Predicted by TMHMM Server   

print all transporters   |  Tab-delimited format

ATP-Dependent

ABCF-ATPaseP-ATPase
The ATP-binding Cassette (ABC) Superfamily
PROTEINSUBSTRATETC#
ABCmembranebinding protein
PSPTO4165  0
PSPTO0315  12
PSPTO0314  0
iron(III)

PSPTO0311 (cysA) 0
PSPTO0309 (cysT) 6
PSPTO0310  6
PSPTO0308 (sbp) 0
sulfate

PSPTO0264  0
PSPTO0265  5
PSPTO0266  6
PSPTO0267  0
PSPTO3717  0
oligopeptide

PSPTO0252  0
PSPTO0250 ** 6
PSPTO0251 ** 4
PSPTO0249  0
oligopeptide/dipeptide



PSPTO2307  0
nitrate

PSPTO2368 (rbsA-1) 0
PSPTO2372  0
PSPTO2369 (rbsC-1) 9
PSPTO2367 (rbsB-1) 1
D-ribose

PSPTO2398 (rbsA-2) 0
PSPTO2400 (rbsC-2) 8
PSPTO2399 (rbsB-2) 1
D-ribose

PSPTO2415  0
PSPTO2414  0
PSPTO2416  8
PSPTO2419  0
PSPTO2418  0
branched-chain amino acid

PSPTO4240  0
PSPTO4239  6
PSPTO4238  0
sulfonate/taurine?



PSPTO4197 ? 0
spermidine/putrescine

PSPTO4174  0
PSPTO4172  4
PSPTO4173  5
PSPTO4171  1
glutamate/aspartate

PSPTO0462  0
PSPTO0463  6
PSPTO0464  0
glycine betaine/L-proline

PSPTO0428 (ftsE) 0
PSPTO0429 (ftsX) 4

cell division

PSPTO4075  0
PSPTO4074  0
PSPTO4076  8
PSPTO4078  1
branched-chain amino acid


PSPTO4091 * 5

toxin secretion?

PSPTO4112  0
PSPTO4111  0
PSPTO4110  10
PSPTO4109  9

branched-chain amino acid

PSPTO4140  0
PSPTO4138  5
PSPTO4136  0
histidine/arginine/ornithine


PSPTO1637  10

lipoprotein



PSPTO1600  0
amino acid?

PSPTO1355  0
PSPTO1358  8
PSPTO1359  9

sugar

PSPTO1295 (gltK) 0
PSPTO1293  6
PSPTO1294  7
PSPTO1292  0
sugar

PSPTO1258  0
PSPTO1256  8
PSPTO1257  8
PSPTO1255  1
amino acid

PSPTO5248  0
PSPTO5247 ** 5
PSPTO5246 ** 5
PSPTO5245  0
glutamine

PSPTO5262 (metN-2) 0
PSPTO5261 (metI-2) 5
PSPTO5260 (metQ-2) 0
PSPTO5216  0
D-methionine

PSPTO5266 (znuC) 0
PSPTO5265 (znuB) 7
PSPTO5268 (znuA) 1
zinc

PSPTO5273  0
PSPTO5272  6
PSPTO5271  0
histidine/glycine betaine/L-proline

PSPTO5303 (potG) 0
PSPTO5302 (potH) 6
PSPTO5301 (potI) 6

putrescine

PSPTO5357  0
PSPTO5359  4
PSPTO5360  3
PSPTO5358  1
amino acid

PSPTO5320 (tauB) 0
PSPTO5321 (tauC) 6
PSPTO5319 (tauA) 0
taurine

PSPTO5314  0
PSPTO5315 (ssuC) 8
PSPTO5316  0
PSPTO0350  0
aliphatic sulfonate


PSPTO5306 ** 0
PSPTO5307 ** 0

putrescine



PSPTO3335  0
molybdenum

PSPTO3266 (pstB-1) 0
PSPTO3267 (pstA) 6
PSPTO3268 (pstC) 6
PSPTO3269 (pstS) 0
phosphate

PSPTO3258  0
PSPTO3257  9
PSPTO3256  0
iron(III)

PSPTO3251  0
PSPTO3252  0
PSPTO3249  6
PSPTO3250  5
PSPTO3248  0
dipeptide

PSPTO3330 (tliD) 5


protease secretion



PSPTO2486  0
taurine?

PSPTO2524  0
PSPTO2523  6
PSPTO2522  6
PSPTO2518  1
spermidine/putrescine

PSPTO2555 (phnC) 0
PSPTO2557 (phnE) 6
PSPTO2556 (phnD) 0
phosphonate

PSPTO2564  0
PSPTO2563  0


phosphonate

PSPTO2573  0
PSPTO2572  0
PSPTO2575  6
PSPTO2574  6
PSPTO2576  0
dipeptide/oligopeptide


PSPTO2604 * 5
PSPTO2603 * 5

toxin secretion

PSPTO2630  0
PSPTO2629  5
PSPTO2627  1
amino acid

PSPTO2633  0
PSPTO2634  8
PSPTO2635  0
manganese ion

PSPTO2639  0
PSPTO2640 (araH) 10
PSPTO2638 (abP) 0
L-arabinose

PSPTO2664  0
PSPTO2666  8
PSPTO2665  7
PSPTO2667  1
spermidine/putrescine


PSPTO2706  8
PSPTO2705  6
PSPTO2707  1
PSPTO0364  0
sorbitol/mannitol

PSPTO2778  0
PSPTO2777  3
PSPTO2776  4
PSPTO2775  0
glutamine



PSPTO2785  0
putrescine

PSPTO2786  0
PSPTO2787  6
PSPTO2788  0
sulfonate/taurine?

PSPTO2812  0
PSPTO2811  6
PSPTO2810  6
PSPTO0087  0
PSPTO2814  0
dipeptide

PSPTO0138  0


? (Uup homolog/duplicated ATPase)


PSPTO0166 ** 0

glycine betaine/L-proline

PSPTO5561  0
PSPTO5563  9
PSPTO5562  0
iron(III) dicitrate

PSPTO5550  0
PSPTO5551  13

nitrate

PSPTO5484 (pstB-2) 0
PSPTO5486  7
PSPTO5485  6
PSPTO5487  0
phosphate

PSPTO4888  0
PSPTO4887  9
PSPTO4886  8
PSPTO4885  0
branched-chain amino acid

PSPTO4916  0
PSPTO4915  0
PSPTO4918 (braD) 7
PSPTO4917 (braE) 11
PSPTO4919  0
branched-chain amino acid

PSPTO3521  0


? (Uup homolog/duplicated ATPase)

PSPTO3489  0
PSPTO3488  7
PSPTO3049  1
PSPTO3490  0
PSPTO2473  0
rhizopine



PSPTO5010  0
amino acid

PSPTO5182  0
PSPTO5181  4
PSPTO5180  0
cystine

PSPTO5188 (metN-1) 0
PSPTO5189 (metI-1) 5
PSPTO5187 (metQ-1) 0
D-methionine

PSPTO5197  0
PSPTO5196  6
PSPTO5195  0
nitrate/sulfonate/taurine

PSPTO4447  0
PSPTO4446  5
PSPTO4445 ? 1
?

PSPTO4452  0

PSPTO4451 ? 0
?

PSPTO4535  0
PSPTO4538  6
PSPTO4537  6
PSPTO4534  0
dipeptide/oligopeptide

PSPTO4551  5


multidrug?

PSPTO4568
PSPTO4565
PSPTO4564  0
PSPTO4563 (dppC) 5
PSPTO4562  6
PSPTO4561 (dppA) 0
PSPTO4558  0
PSPTO4559  0
PSPTO4557  0
dipeptide/oligopeptide

PSPTO4575  0
PSPTO4578 ** 5
PSPTO4577 ** 0
PSPTO4576 ** 6

glycine betaine/carnitine/choline

PSPTO4602  0


? (Uup homolog/duplicated ATPase)


PSPTO2832 (macB)* 3

macrolide?

PSPTO2913  0
PSPTO2914  5
PSPTO2912  0
glutamine



PSPTO2962 ? 0
branched-chain amino acid?

PSPTO2975 (modC) 0
PSPTO2974 (modB) 5
PSPTO2973 (modA) 0
molybdenum

PSPTO2990  0
PSPTO2986  0
PSPTO2989  8
PSPTO2988  8

branched-chain amino acid

PSPTO2995  0
PSPTO2994  9
PSPTO2993  9
PSPTO2996  0
D-ribose

PSPTO3004 (xylG) 0
PSPTO3005 (xylH) 10
PSPTO3003 (xylF) 0
D-xylose

PSPTO3009  0
PSPTO3010  5
PSPTO3008  0
amino acid

PSPTO3032  0
PSPTO3031  6
PSPTO3030  6
PSPTO3029  0
dipeptide/oligopeptide

PSPTO3060  0
PSPTO3059  6
PSPTO3058  0
glycine betaine


PSPTO3071 * 5

?

PSPTO3083  0
PSPTO3085  5
PSPTO3084  3
PSPTO3082  0
glutamine


PSPTO3090  6
PSPTO3088  0
dipeptide/oligopeptide/nickel



PSPTO3625  0
sulfate

PSPTO3635 (ccmA) 0
PSPTO3634 (ccmB) 6
PSPTO3633 (ccmC) 6

heme

PSPTO3720  0
PSPTO3719  6
PSPTO3718  6
PSPTO3716  0
oligopeptide

PSPTO3739  0
PSPTO3737  6
PSPTO3735  0
trehalose/maltose

PSPTO3855  0
PSPTO3854  6

daunorubicin

PSPTO3882  0
PSPTO3881  7
PSPTO3880  7
PSPTO3878  0
Iron(III)

PSPTO0489  0
PSPTO0488  6
PSPTO0487  6
PSPTO0486  0
Iron(III)

PSPTO0562  0
PSPTO0565  6
PSPTO0564  6
PSPTO0563  0
spermidine/putrescine

PSPTO0661 (ugpC) 0
PSPTO0663 (ugpA) 6
PSPTO0662 (ugpE) 6
PSPTO0664 (ugpB) 0
glycerol-3-phosphate

PSPTO0682  0


heterocyst specific

PSPTO0705  0
PSPTO1075  0
PSPTO1076  6
PSPTO0704  7

O-antigen

PSPTO0760  0
PSPTO0762 (fecC) 9
PSPTO0761 (fecD) 9
PSPTO0763 (fecB) 0
iron(III) dicitrate

PSPTO0769  0
PSPTO0768  9
PSPTO0767  9

sugar

PSPTO0790  0
PSPTO0789  6
PSPTO0788  6
PSPTO0791  0
phosphonate

PSPTO0886 (malK) 0
PSPTO0888  6
PSPTO0887  6
PSPTO0889  0
trehalose/maltose

PSPTO1638  0
PSPTO2267  0
PSPTO2266 ? 10
PSPTO2256 ? 0
?


PSPTO2159 * 4

lipoprotein?


PSPTO2153 (pvdE)* 5

hemolysin secretion? 3.A.1.113.1

PSPTO2140  0
PSPTO2139  8
PSPTO2138 ? 0
PSPTO2141  1
manganese ion

PSPTO2110 (lolD) 0
PSPTO2109 (lolC) 4
PSPTO2111 (lolE) 4

lipoprotein


PSPTO2021 * 6

helymsin secretion

PSPTO1830 (hisP) 0
PSPTO4137  5
PSPTO1827  5
PSPTO1828  5
PSPTO1826  0
histdine/arginine/ornithine

PSPTO1797  0
PSPTO1796  7
PSPTO1788  1
PSPTO1791  0
PSPTO2423  1
aliphatic sulfonate


PSPTO1736 * 5

toxin secretion


PSPTO1133  5
PSPTO1134  0
amino acid

PSPTO1160  0


sugar



PSPTO2746  0
phosphate

PSPTO4889  0
PSPTO2417  7
PSPTO4077  7
PSPTO4108  0
branched-chain amino acid


PSPTO2490 * 5
PSPTO4984 (msbA)* 5

toxin secretion

PSPTO3740  0
PSPTO3738  6
PSPTO2731 ? 0
D-ribose

PSPTO2766  0


? (Uup homolog/duplicated ATPase)

PSPTO3091  0
PSPTO3089 (nikB) 5

oligopeptide/nickel


PSPTO1622 ** 0

glycine betaine/L-proline


PSPTO2915 ** 3
PSPTO2628 ** 5

glutamine

PSPTO2875  0
PSPTO2876 ? 4

lipoprotein?

*   contains both an ABC and a membrane domain as one polypeptide
**   contains both a membrane domain and a binding protein domain as one polypeptide
The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
PROTEIN POSSIBLE SUBSTRATETC#
PSPTO5598 (atpC)     0
PSPTO5599 (atpD)     0
PSPTO5600 (atpG)     0
PSPTO5601 (atpA)     0
PSPTO5602 (atpH)     0
PSPTO5603 (atpF)     1
PSPTO5604 (atpE)     2
PSPTO5605 (atpB)     6
PSPTO5606 (atpI)     4
protons

The P-type ATPase (P-ATPase) Superfamily
PROTEIN POSSIBLE SUBSTRATETC#
PSPTO5279 (cadA-1)     5
PSPTO5532 (cadA-2)     7
cadmium ion

PSPTO0750      8
copper

PSPTO2244 (kdpC)     1
PSPTO2243 (kdpB)     7
PSPTO2242 (kdpA)     10
potassium ion

PSPTO1996      7
cation




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