Transporter Proteins in Nautilia sp. Am-H

Confidence Level of Functional Assignments:
	Weak Bioinformatic Evidence		Strong Bioinformatic Evidence		Clear Orthologue to Experimentally Characterized		Experimental Characterized
Transmebrane Segments (TMS); Predicted by TMHMM Server

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ATP-Dependent

ABC F-ATPase IISP P-ATPase

The ATP-binding Cassette (ABC) Superfamily
PROTEIN			SUBSTRATE	TC#
ABC	membrane	binding protein
GAMH-ORF00192 GAMH-ORF00194	GAMH-ORF00079 GAMH-ORF00080	GAMH-ORF00076 GAMH-ORF01269	branched-chain amino acid
GAMH-ORF00179	GAMH-ORF00178 GAMH-ORF00182	GAMH-ORF00176	molybdate
GAMH-ORF00294	GAMH-ORF00292 GAMH-ORF00293	GAMH-ORF00291	phosphate
GAMH-ORF00432	GAMH-ORF00935		lipoprotein releasing
GAMH-ORF00497	GAMH-ORF00498		cell division
GAMH-ORF00562	GAMH-ORF00560	GAMH-ORF00561	amino acid (glutamine)
	GAMH-ORF00563 GAMH-ORF00564	GAMH-ORF00565	amino acid (glutamine)
GAMH-ORF00568	GAMH-ORF00947	GAMH-ORF00824	toluene tolerance
GAMH-ORF00578	GAMH-ORF00579		lipoprotein releasing
GAMH-ORF00701	GAMH-ORF00700	GAMH-ORF00699	iron(III)
GAMH-ORF00705	GAMH-ORF00703		cobalt ion
GAMH-ORF00757		GAMH-ORF01163	? (YhbG-YhbN)
GAMH-ORF00905	GAMH-ORF00851		?
GAMH-ORF00976			? (Uup homolog/duplicated ATPase)
		GAMH-ORF01156	amino acid
GAMH-ORF01279	GAMH-ORF01281	GAMH-ORF01278	sulfate/molybdate
GAMH-ORF01606	GAMH-ORF01604 GAMH-ORF01605		multidrug
	GAMH-ORF01686 *		lipid A export
	GAMH-ORF01697 *		multidrug
GAMH-ORF01720	GAMH-ORF01721	GAMH-ORF01719	manganese/zinc ion
*   contains both an ABC and a membrane domain as one polypeptide
**   contains both a membrane domain and a binding protein domain as one polypeptide
The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
PROTEIN		POSSIBLE SUBSTRATE		TC#
GAMH-ORF00023 GAMH-ORF00024 GAMH-ORF00025 GAMH-ORF00028 GAMH-ORF00029		sodium ion (V-type)
GAMH-ORF00300 GAMH-ORF00301 GAMH-ORF00303 GAMH-ORF00304 GAMH-ORF00305 GAMH-ORF00306 GAMH-ORF01003 GAMH-ORF01440		protons
The Type II (General) Secretory Pathway (IISP) Family
PROTEIN		POSSIBLE SUBSTRATE		TC#
GAMH-ORF01318		signal recognition particle SRP54
GAMH-ORF01479		signal recognition particle protein SRP54
GAMH-ORF01499		signal recognition particle-docking protein FtsY
GAMH-ORF01582		preprotein translocase SecY
The P-type ATPase (P-ATPase) Superfamily
PROTEIN		POSSIBLE SUBSTRATE		TC#
GAMH-ORF00737		proton

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