Transporter Proteins in

Lactobacillus acidophilus NCFM


Confidence Level of Functional Assignments:
weak Weak Bioinformatic Evidence strong Strong Bioinformatic Evidence orthologue Clear Orthologue to Experimentally Characterized experimental Experimental Characterized
TMS Transmebrane Segments (TMS); Predicted by TMHMM Server   

print all transporters   |  Tab-delimited format

ATP-Dependent

ABCF-ATPaseIISPP-ATPase
The ATP-binding Cassette (ABC) Superfamily
PROTEINSUBSTRATETC#
ABCmembranebinding protein
LBA0047  0
LBA0048  8
LBA0049  1
?


LBA0074 * 5
LBA0075 * 5

bacteriocin

LBA0094  0
LBA0093  5

cobalt ion

LBA0111  0
LBA0112 ** 6

glutamate/glutamine

LBA0135 (glnQ) 0
LBA0134 (glnP)** 4

amino acid (glutamate/glutamine)

LBA0152  0
LBA0153  6
LBA0154  6
LBA0014  0
LBA0151  1
alkylphosphonate

LBA0202 (oppD) 0
LBA0203 (oppF) 0
LBA0200 (oppB) 6
LBA0201 (oppC) 5
LBA0197 (oppA) 0
LBA0198 (oppA) 0
LBA1216  0
oligopeptide

LBA0246  0
LBA0247  6

multidrug

LBA0319  0
LBA0320  0
LBA0321  4

cobalt ion

LBA0364  0
LBA0365  0
LBA0362  6
LBA0363  6
LBA0361  1
phosphate

LBA0397  0


? (Uup homolog/duplicated ATPase)

LBA0506 (msmK) 0
LBA0503 (msmF) 6
LBA0504 (msmG) 6
LBA0502 (msmE) 0
sugar 3.A.1.1.20

LBA0570  0


? (Uup homolog/duplicated ATPase)


LBA0574 * 6
LBA0575 * 5

multidrug

LBA0578 (glnQ) 0
LBA0581 (glnM) 3
LBA0582 (glnP) 4
LBA0579 (glnH) 0
amino acid(glutamine)


LBA0594 * 5
LBA0597 * 6

multidrug

LBA0709 (potA) 0
LBA0711 (potB) 6
LBA0712 (potC) 6
LBA0713 (potD) 1
spermidine/putrescine

LBA0905  0
LBA0906  5
LBA0904  1
LBA1395  1
D-methionine

LBA0921  0
LBA0920  4

cobalt ion

LBA1045  0
LBA1042  5
LBA1044  4
LBA0572 (glnH) 0
LBA1046  1
amino acid (glutamine)


LBA1131 * 5
LBA1132 * 6

lactococcin A

LBA1188  0
LBA1186 ? 6
LBA1187 ? 6

multidrug

LBA1250  0


? (Uup homolog/duplicated ATPase)


LBA1276 * 5
LBA1277 * 6

multidrug

LBA1305 (oppF) 0
LBA1306 (oppD) 0
LBA1302 (oppC) 5
LBA1303 (oppB) 6
LBA1300 (oppA) 0
LBA1301 (oppA) 0
LBA1346 (oppA) 0
LBA1347 (oppA) 0
LBA1400 (oppA) 0
LBA1665 (oppA) 0
LBA1958 (oppA) 0
LBA1961 (oppA) 0
oligopeptide


LBA1357 * 6
LBA1358 * 6

lactococcin A

LBA1439  0
LBA1440  6
LBA1441  7
LBA1442  0
sugar

LBA1483 (rbsA) 0
LBA1482 (rbsC) 7
LBA1484 (rbsD) 0
LBA1481 (rbsB) 0
ribose

LBA1499  0
LBA1500  7
LBA1510  14

?

LBA1585  0
LBA1584  10

? EcsB

LBA1645  0
LBA1643  6
LBA1644  5
LBA0585  0
LBA1641  0
glycerol-3-phosphate


LBA1657 * 6

multidrug

LBA1673 (glnQ) 0
LBA1674  4
LBA1672  0
amino acid (glutamine)

LBA1680  0
LBA1679  10

export?

LBA1755  0
LBA1754  0

? (Fe-S assembly/SufBCD system)

LBA1759  0


? (Uup homolog/duplicated ATPase)

LBA1772  0
LBA1771  7
LBA1773 (psaA) 1
zinc ion

LBA1783  0
LBA1782  6

sodium ion export?


LBA1796 (plnG)* 5

lactacin F secretion


LBA1821 * 5
LBA1822 * 6

multidrug

LBA1838  0
LBA1839  4

?


LBA1859 (nisT)* 6

nisin export

LBA1867 (msmK) 0
LBA1864  6
LBA1865  8
LBA1866  0
maltose


LBA1876 * 5

multidrug?

LBA1913  0
LBA1914  8

?


LBA1933 (mutT)* 5

multidrug


LBA1939 * 4

macrolide efflux

LBA1944  0
LBA1945  9
LBA1946  10
LBA1942 ? 0
LBA1943  0
sugar?

*   contains both an ABC and a membrane domain as one polypeptide
**   contains both a membrane domain and a binding protein domain as one polypeptide
The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
PROTEIN POSSIBLE SUBSTRATETC#
LBA0772      4
LBA0773      2
LBA0774      1
LBA0775      0
LBA0776      0
LBA0777      0
LBA0778      0
LBA0779      0
protons

The Type II (General) Secretory Pathway (IISP) Family
PROTEIN POSSIBLE SUBSTRATETC#
LBA1290      0
signal recognition particle protein Ffh

LBA1295 (ftsY)     0
signal recognition particle-docking protein FtsY

The P-type ATPase (P-ATPase) Superfamily
PROTEIN POSSIBLE SUBSTRATETC#
LBA0212      10
magnesium ion

LBA0523 (pacL)     10
calcium ion

LBA0541 (cadA)     6
cadmium ion

LBA0654 (pacL)     8
sodium/potassium ion

LBA0903      10
cation

LBA1234      8
cadmium/manganese ion

LBA1389      10
calcium ion

LBA1683 (pacL)     9
calcium ion

LBA1929      5
cadmium ion

LBA1966 (copA)     8
copper ion




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