Completet list of analyzed genomes

Organism Taxonomy Genome Size(Mb) ORF Count Total Transport Proteins Percent of ORF
Archaea
Aeropyrum pernix K1 Crenarchaeota 1.67 1840 78 4.2%
Metallosphaera sedula DSM 5348 Crenarchaeota 2 N/A 131 N/A
Nitrosopumilus maritimus SCM1 Crenarchaeota 1 N/A 54 N/A
Pyrobaculum aerophilum IM2 Crenarchaeota 2.22 2605 78 3%
Staphylothermus marinus F1 Crenarchaeota 1 N/A 82 N/A
Sulfolobus solfataricus P2 Crenarchaeota 2.99 2977 127 4.3%
Sulfolobus tokodaii strain7 Crenarchaeota 2.81 2826 133 4.7%
Sulfolobus acidocaldarius DSM639 Crenarchaeota-Thermoprotei 2.23 2223 115 5.2%
Archaeoglobus fulgidus DSM4304 Euryarchaeota 2.18 2420 104 4.3%
Halobacterium sp. NRC-1 Euryarchaeota 2.57 2622 104 4%
Haloferax volcanii Euryarchaeota 4.2 N/A 200 N/A
Methanobacterium thermoautotrophicum deltaH Euryarchaeota 1.75 1873 66 3.5%
Methanococcus jannaschii DSM Euryarchaeota 1.66 1729 122 7.1%
Methanococcus maripaludis S2 Euryarchaeota 1.66 1722 88 5.1%
Methanopyrus kandleri AV19 Euryarchaeota 1.69 1687 36 2.1%
Methanosarcina acetivorans C2A Euryarchaeota 5.75 4540 214 4.7%
Methanosarcina mazei Goe1 Euryarchaeota 4.1 3371 165 4.9%
Picrophilus torridus DSM9790 Euryarchaeota 1.55 1535 114 7.4%
Pyrococcus abyssi GE5 Euryarchaeota 1.77 1769 89 5%
Pyrococcus furiosus DSM3638 Euryarchaeota 1.91 2065 102 4.9%
Pyrococcus horikoshii OT3 Euryarchaeota 1.8 1801 92 5.1%
Thermoplasma acidophilum DSM1728 Euryarchaeota 1.56 1478 105 7.1%
Thermoplasma volcanium GSS1 Euryarchaeota 1.58 3025 115 3.8%
Natronomonas pharaonis DSM2160 Euryarchaeota-Halobacteria 2.75 2822 120 4.3%
Haloarcula marismortui ATCC43049 Euryarchaeota-Halobacteria 4.27 4240 173 4.1%
Methanospirillum hungatei JF-1 Euryarchaeota-Methanomicrobia 3.54 N/A 270 N/A
Thermococcus kodakaraensis KOD1 Euryarchaeota-Thermococci 2.09 2305 116 5%
Nanoarchaeum equitans Kin4-M Nanoarchaea 0.5 563 10 1.8%
Bacteria
Acidothermus cellulolyticus 11B Actinobacteria 2 N/A 110 N/A
Arthrobacter aurescens TC1 Actinobacteria 5 N/A 359 N/A
Bifidobacterium longum NCC2705 Actinobacteria 2.26 1729 141 8.2%
Corynebacterium diphtheriae NCTC13129 Actinobacteria 2.49 2272 159 7%
Corynebacterium efficiens YS-314 Actinobacteria 3.14 2950 204 6.9%
Corynebacterium glutamicum ATCC13032 Actinobacteria 3.31 2993 236 7.9%
Frankia alni ACN14a Actinobacteria 7.5 N/A 234 N/A
Leifsonia xyli CTCB07 Actinobacteria 2.58 2030 109 5.4%
Mycobacterium avium K-10 Actinobacteria 4.83 4350 170 3.9%
Mycobacterium bovis AF2122/97 Actinobacteria 4.35 3920 153 3.9%
Mycobacterium bovis BCG 1173P2 Actinobacteria 4 N/A 164 N/A
Mycobacterium leprae TN Actinobacteria 3.26 1605 56 3.5%
Mycobacterium smegmatis str. MC2 155 Actinobacteria 7 N/A 423 N/A
Mycobacterium tuberculosis H37Rv Actinobacteria 4.4 3927 148 3.8%
Nocardia farcinica IFM10152 Actinobacteria 6.29 5936 269 4.5%
Propionibacterium acnes KPA171202 Actinobacteria 2.56 2297 179 7.8%
Streptomyces avermitilis MA-4680 Actinobacteria 9.03 7575 430 5.7%
Streptomyces coelicolor A3(2) Actinobacteria 8.7 7897 442 5.6%
Tropheryma whippelii TW08/27 Actinobacteria 0.93 783 30 3.8%
Tropheryma whipplei Twist Actinobacteria 0.93 287 9 3.1%
Aquifex aeolicus VF5 Aquificae 1.5 1529 59 3.9%
Bacteroides fragilis NCTC9343 Bacteroidetes 5.2 4274 190 4.4%
Bacteroides fragilis YCH46 Bacteroidetes 5.31 4625 191 4.1%
Bacteroides thetaiotaomicron VPI-5482 Bacteroidetes 6.26 4778 205 4.3%
Cytophaga hutchinsonii ATCC33406 Bacteroidetes 4.43 N/A 140 N/A
Candidatus Sulcia muelleri GWSS Bacteroidetes/Chlorobi 0 N/A 6 N/A
Gramella forsetii KT0803 Bacteroidetes/Chlorobi 3 N/A 214 N/A
Prosthecochloris vibrioformis DSM 265 Bacteroidetes/Chlorobi 2 N/A 92 N/A
Chlamydia muridarum Nigg Chlamydia 1.07 916 40 4.4%
Chlamydia pneumoniae AR39 Chlamydia 1.23 1112 45 4%
Chlamydia trachomatis serovarD Chlamydia 1.05 894 47 5.3%
Chlamydophila caviae GPIC Chlamydia 1.17 1005 47 4.7%
Chlamydophila pneumoniae TW-183 Chlamydia 1.23 1113 44 4%
Parachlamydia sp. UWE25 Chlamydia 2.41 2031 79 3.9%
Chlamydophila abortus S26/3 Chlamydiae/Verrucomicrobia 1 N/A 49 N/A
Chlorobium chlorochromatii CaD3 Chlorobi 2.57 2002 77 3.8%
Pelodictyon luteolum DSM273 Chlorobi 2.36 2083 104 5%
Chlorobium tepidum TLS Chlorobi 2.1 2252 84 3.7%
Dehalococcoides sp. CBDB1 Chloroflexi 1.4 1458 56 3.8%
Dehalococcoides ethenogenes 195 Chloroflexi 1.5 1580 55 3.5%
Chrysiogenes arsenatis DSM11915 Chrysiogenetes 0 N/A 110 N/A
Gloeobacter violaceus PCC7421 Cyanobacteria 4.66 4430 153 3.5%
Nostoc sp. PCC7120 Cyanobacteria 6.41 6129 277 4.5%
Prochlorococcus marinus MED4(CCMP1378) Cyanobacteria 1.66 1712 56 3.3%
Prochlorococcus marinus MIT9313 Cyanobacteria 2.4 2265 88 3.9%
Prochlorococcus marinus SS120(CCMP1375) Cyanobacteria 1.75 1882 53 2.8%
Synechococcus elongatus PCC6301 Cyanobacteria 2.7 2524 107 4.2%
Synechococcus sp. CC9311 Cyanobacteria 2.4 N/A 127 N/A
Synechococcus sp. CC9605 Cyanobacteria 2.5 N/A 83 N/A
Synechococcus sp. CC9902 Cyanobacteria 2.5 N/A 78 N/A
Synechococcus sp. RCC307 Cyanobacteria 2 N/A 107 N/A
Synechococcus sp. WH7803 Cyanobacteria 2 N/A 132 N/A
Synechococcus sp. WH8102 Cyanobacteria 2.43 2517 88 3.5%
Synechocystis sp. PCC6803 Cyanobacteria 3.57 3167 168 5.3%
Thermosynechococcus elongatus BP-1 Cyanobacteria 2.6 2475 131 5.3%
Geovibrio thiophilus AAFu3T Deferribacteres 0 N/A 230 N/A
Synergistes jonesii Deferribacteres 0 N/A 188 N/A
Deinococcus radiodurans R1 Deinococcus-Thermus 3.28 3182 157 4.9%
Thermus thermophilus HB27 Deinococcus-Thermus 2.13 2210 107 4.8%
Aster yellows AYWB Firmicutes 0 N/A 28 N/A
Bacillus anthracis A0039 Firmicutes 5.22 N/A 433 N/A
Bacillus anthracis A2012 Firmicutes 4.5 5544 455 8.2%
Bacillus anthracis Ames Firmicutes 5.22 5311 391 7.4%
Bacillus anthracis France Firmicutes 5.21 N/A 401 N/A
Bacillus anthracis Kruger B Firmicutes 5.19 N/A 429 N/A
Bacillus anthracis USA6153 Firmicutes 5.23 N/A 440 N/A
Bacillus anthracis Vollum Firmicutes 5.21 N/A 426 N/A
Bacillus cereus ATCC14579 Firmicutes 5.41 5255 390 7.4%
Bacillus halodurans C-125 Firmicutes 4.2 4066 304 7.5%
Bacillus licheniformis ATCC14580 Firmicutes 4.22 4161 332 8%
Bacillus subtilis 168 Firmicutes 4.2 4112 297 7.2%
Bacillus thuringiensis konkukian 97-27 Firmicutes 5.24 5117 419 8.2%
Caldicellulosiruptor saccharolyticus DSM 8903 Firmicutes 3 N/A 134 N/A
Carboxydothermus hydrogenoformans Z-2901 Firmicutes 2.1 2620 106 4%
Clostridium acetobutylicum ATCC824 Firmicutes 4.1 3848 223 5.8%
Clostridium difficile 630 Firmicutes 4 N/A 310 N/A
Clostridium perfringens 13 Firmicutes 3 2723 196 7.2%
Clostridium perfringens ATCC13124 Firmicutes 3 N/A 196 N/A
Clostridium perfringens SM101 Firmicutes 3 N/A 183 N/A
Clostridium tetani E88 Firmicutes 2.8 2373 164 6.9%
Coprothermobacter proteolyticus DSM5265 Firmicutes 0 N/A 85 N/A
Enterococcus faecalis V583 Firmicutes 3 3113 222 7.1%
Geobacillus kaustophilus HTA426 Firmicutes 3.59 3540 188 5.3%
Lactobacillus acidophilus NCFM Firmicutes 1.99 1864 169 9.1%
Lactobacillus brevis ATCC367 Firmicutes 2 N/A 117 N/A
Lactobacillus bulgaricus ATCCBAA-365 Firmicutes 2.3 N/A 68 N/A
Lactobacillus casei ATCC334 Firmicutes 2.5 N/A 164 N/A
Lactobacillus cremoris SK11 Firmicutes 2.3 N/A 138 N/A
Lactobacillus gasseri ATCC33323 Firmicutes 1.8 N/A 141 N/A
Lactobacillus johnsonii NCC533 Firmicutes 3 1821 195 10.7%
Lactobacillus plantarum WCFS1 Firmicutes 3.31 3009 284 9.4%
Lactococcus lactis IL1403 Firmicutes 2.36 2266 166 7.3%
Leuconostoc mesenteroides ATCC8293 Firmicutes 2 N/A 140 N/A
Listeria innocua Clip11262(rhamnose-negative) Firmicutes 3.01 3043 216 7.1%
Listeria monocytogenes 4b Firmicutes 2.9 2821 205 7.3%
Listeria monocytogenes EGD-e Firmicutes 2.94 2846 226 7.9%
Mesoplasma florum L1 Firmicutes 0.79 683 45 6.6%
Mycoplasma agalactiae PG2 Firmicutes 0 N/A 45 N/A
Mycoplasma capricolum Firmicutes 1.2 N/A 56 N/A
Mycoplasma gallisepticum R Firmicutes 1 726 36 5%
Mycoplasma genitalium G-37 Firmicutes 0.58 484 26 5.4%
Mycoplasma hyopneumoniae 232 Firmicutes 0.89 691 43 6.2%
Mycoplasma mobile 163K Firmicutes 1 633 37 5.8%
Mycoplasma mycoides PG1T Firmicutes 1.21 1016 72 7.1%
Mycoplasma penetrans HF-2 Firmicutes 1.36 1037 55 5.3%
Mycoplasma pneumoniae M129 Firmicutes 0.81 681 26 3.8%
Mycoplasma pulmonis UAB CTIP Firmicutes 0.96 782 46 5.9%
Mycoplasma synoviae 53 Firmicutes 0 N/A 48 N/A
Oceanobacillus iheyensis HTE831 Firmicutes 3.6 3496 211 6%
Oenococcus oeni MCW PSU-1 Firmicutes 1.8 N/A 134 N/A
Onion yellows phytoplasma OY-M Firmicutes 0 N/A 30 N/A
Pediococcus pentosaceus ATCC25745 Firmicutes 2 N/A 149 N/A
Pelotomaculum thermopropionicum SI Firmicutes 3 N/A 112 N/A
Phytoplasma aster yellows AYWB Firmicutes 0 N/A 26 N/A
Phytoplasma asteris OY-M Firmicutes 0.86 754 27 3.6%
Staphylococcus aureus COL Firmicutes 2.81 2618 174 6.6%
Staphylococcus aureus N315 Firmicutes 2.81 2625 212 8.1%
Staphylococcus epidermidis ATCC12228 Firmicutes 2.5 2419 186 7.7%
Staphylococcus epidermidis RP62a Firmicutes 2.4 2526 182 7.2%
Streptococcus agalactiae 2603V/R Firmicutes 2.16 2124 158 7.4%
Streptococcus agalactiae NEM316 Firmicutes 2.16 2094 158 7.5%
Streptococcus gordonii Challis NCTC7868 Firmicutes 2.19 N/A 148 N/A
Streptococcus mutans UAB159 Firmicutes 2.03 1960 138 7%
Streptococcus pneumoniae TIGR4 Firmicutes 2.2 2094 140 6.7%
Streptococcus pyogenes M1 Firmicutes 1.85 1697 111 6.5%
Streptococcus sanguinis SK36 Firmicutes 2 N/A 149 N/A
Streptococcus thermophilus CNRZ1066 Firmicutes 1.8 1915 127 6.6%
Streptococcus thermophilus LMD-9 Firmicutes 1.8 N/A 99 N/A
Symbiobacterium thermophilum IAM14863 Firmicutes 3.57 3337 177 5.3%
Syntrophomonas wolfei Goettingen Firmicutes 2.94 N/A 99 N/A
Thermoanaerobacter tengcongensis MB4 Firmicutes 2.69 2588 131 5.1%
Ureaplasma urealyticum serovar3 Firmicutes 0.75 614 30 4.9%
Fusobacterium nucleatum ATCC25586 Fusobacteria 2.17 2067 163 7.9%
Thermodesulfovibrio yellowstonii DSM11347 Nitrospirae 0 N/A 70 N/A
Pirellula sp. 1 Planctomycetes 7.15 7325 163 2.2%
Candidatus Pelagibacter ubique HTCC1062 Proteobacteria-Alpha 1.31 1354 88 6.5%
Nitrobacter winogradskyi Nb-255 Proteobacteria-Alpha 3.4 3122 106 3.4%
Agrobacterium radiobacter K84 Proteobacteria-Alpha 5 N/A 530 N/A
Agrobacterium tumefaciens str. C58 Proteobacteria-Alpha 5 N/A 412 N/A
Agrobacterium vitis S4 Proteobacteria-Alpha 5 N/A 389 N/A
Anaplasma marginale St.Maries Proteobacteria-Alpha 1.2 949 32 3.4%
Anaplasma phagocytophilum HZ Proteobacteria-Alpha 1.5 1264 31 2.5%
Azorhizobium caulinodans ORS 571 Proteobacteria-Alpha 5 N/A 371 N/A
Bartonella henselae Houston-1 Proteobacteria-Alpha 1.93 1488 67 4.5%
Bartonella quintana Toulose Proteobacteria-Alpha 1.58 1142 58 5.1%
Bradyrhizobium japonicum USDA110 Proteobacteria-Alpha 9.11 8317 549 6.6%
Bradyrhizobium sp. BTAi1 Proteobacteria-Alpha 8 N/A 460 N/A
Brucella abortus biovar 1 str. 9-941 Proteobacteria-Alpha 3 N/A 192 N/A
Brucella canis ATCC 23365 Proteobacteria-Alpha 3 N/A 203 N/A
Brucella melitensis 16M Proteobacteria-Alpha 3.3 3198 174 5.4%
Brucella ovis ATCC 25840 Proteobacteria-Alpha 3 N/A 196 N/A
Brucella suis 1330 Proteobacteria-Alpha 3.31 3264 167 5.1%
Caulobacter crescentus CB15 Proteobacteria-Alpha 4.01 3737 158 4.2%
Colwellia psychroerythraea 34H Proteobacteria-Alpha 5.3 4910 245 5%
Ehrlichia canis str. Jake Proteobacteria-Alpha 1 N/A 34 N/A
Ehrlichia chaffeensis Arkansas Proteobacteria-Alpha 1.2 1105 28 2.5%
Ehrlichia ruminantium Welgevonden Proteobacteria-Alpha 1.52 888 30 3.4%
Gluconobacter oxydans 621H Proteobacteria-Alpha 2.92 2664 146 5.5%
Granulibacter bethesdensis CGDNIH1 Proteobacteria-Alpha 2.7 N/A 131 N/A
Hyphomonas neptunium ATCC15444 Proteobacteria-Alpha 3.7 N/A 162 N/A
Jannaschia sp. CCS1 Proteobacteria-Alpha 4.4 4212 252 6%
Maricaulis maris MCS10 Proteobacteria-Alpha 3.37 N/A 143 N/A
Mesorhizobium loti MAFF303099 Proteobacteria-Alpha 7.59 7275 433 6%
Neorickettsia sennetsu Miyayama Proteobacteria-Alpha 0.9 932 30 3.2%
Novosphingobium aromaticivorans DSM 12444 Proteobacteria-Alpha 4 N/A 172 N/A
Orientia tsutsugamushi Boryong Proteobacteria-Alpha 2 N/A 52 N/A
Rhizobium etli CFN 42 Proteobacteria-Alpha 6 N/A 393 N/A
Rhizobium leguminosarum bv. viciae 3841 Proteobacteria-Alpha 7 N/A 511 N/A
Rhodobacter sphaeroides ATCC17025 Proteobacteria-Alpha 4.6 N/A 224 N/A
Rhodospirillum rubrum ATCC 11170 Proteobacteria-Alpha 4 N/A 184 N/A
Rickettsia conorii Malish7 Proteobacteria-Alpha 1.27 1374 81 5.9%
Rickettsia prowazekii MadridE Proteobacteria-Alpha 1.1 835 48 5.7%
Roseobacter sp. MED193 Proteobacteria-Alpha 4.66 N/A 245 N/A
Roseobacter sp. TM1040 Proteobacteria-Alpha 4.5 N/A 217 N/A
Roseovarius nubinhibens ISM Proteobacteria-Alpha 5 N/A 223 N/A
Sar86 sp. Subtype1 Proteobacteria-Alpha 1.2 N/A 64 N/A
Sar86 sp. Subtype2 Proteobacteria-Alpha 1.2 N/A 80 N/A
Silicibacter pomeroyi DSS-3 Proteobacteria-Alpha 4.4 4252 280 6.6%
Sinorhizobium medicae WSM419 Proteobacteria-Alpha 6 N/A 454 N/A
Sinorhizobium meliloti 1021 Proteobacteria-Alpha 6.7 6205 387 6.2%
Sulfitobacter sp. EE-36 Proteobacteria-Alpha 5 N/A 215 N/A
Sulfitobacter sp. NAS-14.1 Proteobacteria-Alpha 5 N/A 227 N/A
Wolbachia sp. wMel Proteobacteria-Alpha 1.5 1195 40 3.3%
Wolbachia pipientis wSim Proteobacteria-Alpha 1 N/A 48 N/A
Wolbachia sp. TRS(B. malayi) Proteobacteria-Alpha 1.08 805 30 3.7%
Zymomonas mobilis ZM4 Proteobacteria-Alpha 2.06 1998 102 5.1%
Nitrosococcus oceani ATCC19707 Proteobacteria-Beta 3.52 3017 124 4.1%
Azoarcus sp. BH72 Proteobacteria-Beta 4 N/A 79 N/A
Azoarcus sp. EbN1 Proteobacteria-Beta 4.73 4599 161 3.5%
Bordetella bronchiseptica RB50 NCTC-13252 Proteobacteria-Beta 5.34 4994 332 6.6%
Bordetella parapertussis 12822 NCTC-13253 Proteobacteria-Beta 4.77 4185 290 6.9%
Bordetella pertussis Tohama I NCTC-13251 Proteobacteria-Beta 4.09 3447 231 6.7%
Burkholderia mallei ATCC23344 Proteobacteria-Beta 5.84 4764 327 6.9%
Burkholderia pseudomallei K96243 Proteobacteria-Beta 7.25 5729 381 6.7%
Dechloromonas aromatica RCB Proteobacteria-Beta 4 N/A 228 N/A
Delftia acidovorans SPH-1 Proteobacteria-Beta 6 N/A 547 N/A
Neisseria gonorrhoeae FA 1090 Proteobacteria-Beta 2 N/A 96 N/A
Neisseria meningitidis MC58 Proteobacteria-Beta 2.27 2079 103 5%
Nitrosomonas europaea ATCC19718 Proteobacteria-Beta 2.81 2461 95 3.9%
Nitrosomonas eutropha C71 Proteobacteria-Beta 2.78 N/A 113 N/A
Ralstonia eutropha H16 Proteobacteria-Beta 4.05 N/A 237 N/A
Ralstonia metallidurans CH34 Proteobacteria-Beta 6 N/A 533 N/A
Ralstonia solanacearum GMI1000 Proteobacteria-Beta 5.81 5116 302 5.9%
Pelobacter carbinolicus DSM2380 Proteobacteria-Delta 3.66 3118 143 4.6%
Bdellovibrio bacteriovorus HD100 Proteobacteria-Delta 3.7 3583 160 4.5%
Desulfotalea psychrophila LSv54 Proteobacteria-Delta 3.66 3236 183 5.7%
Desulfovibrio vulgaris Hildenborough Proteobacteria-Delta 3.2 3531 132 3.7%
Geobacter sulfurreducens PCA Proteobacteria-Delta 2.5 3445 141 4.1%
Syntrophobacter fumaroxidans MPOB Proteobacteria-Delta 0 N/A 186 N/A
Syntrophus aciditrophicus SB Proteobacteria-Delta 3 N/A 112 N/A
Arcobacter butzleri RM4018 Proteobacteria-Epsilon 2 N/A 130 N/A
Campylobacter hominis ATCC BAA-381 Proteobacteria-Epsilon 1 N/A 98 N/A
Campylobacter jejuni NCTC11168 Proteobacteria-Epsilon 1.64 1634 92 5.6%
Helicobacter hepaticus ATCC51449 Proteobacteria-Epsilon 1.8 1875 82 4.4%
Helicobacter pylori 26695 Proteobacteria-Epsilon 1.66 1576 75 4.8%
Nautilia sp. Am-H Proteobacteria-Epsilon 0 N/A 88 N/A
Nitratiruptor sp. SB155-2 Proteobacteria-Epsilon 1 N/A 98 N/A
Nitratiruptor sp. SB155-2 Proteobacteria-Epsilon 1 N/A 97 N/A
Thiomicrospira denitrificans ATCC33889 Proteobacteria-Epsilon 2.2 N/A 97 N/A
Wolinella succinogenes Proteobacteria-Epsilon 2.11 2044 124 6.1%
Candidatus Blochmannia pennsylvanicus BPEN Proteobacteria-Gamma 0.79 610 26 4.3%
Pseudoalteromonas haloplanktis TAC125 Proteobacteria-Gamma 3.85 3486 189 5.4%
Thiomicrospira crunogena XCL-2 Proteobacteria-Gamma 2.43 2192 111 5.1%
Acinetobacter sp. ADP1 Proteobacteria-Gamma 3.6 3325 225 6.8%
Aeromonas hydrophila ATCC7966 Proteobacteria-Gamma 4.7 N/A 341 N/A
Alcanivorax borkumensis SK2 Proteobacteria-Gamma 3.12 N/A 155 N/A
Alkalilimnicola ehrlichei MLHE-1 Proteobacteria-Gamma 3.28 N/A 152 N/A
Azotobacter vinelandii AvOP Proteobacteria-Gamma 5.34 4988 289 5.8%
Baumannia cicadellinicola Proteobacteria-Gamma 1 N/A 25 N/A
Buchnera aphidicola APS Proteobacteria-Gamma 0.64 564 14 2.5%
Buchnera aphidicola Bp Proteobacteria-Gamma 0.62 504 17 3.4%
Buchnera aphidicola Cc Proteobacteria-Gamma 0 N/A 6 N/A
Buchnera aphidicola Sg Proteobacteria-Gamma 0.64 545 18 3.3%
Candidatus Blochmannia floridanus Proteobacteria-Gamma 0.71 583 24 4.1%
Carsonella ruddii PV Proteobacteria-Gamma 0.16 N/A 2 N/A
Coxiella burnetii RSA493 Proteobacteria-Gamma 2.1 2009 87 4.3%
Dichelobacter nodosus VCS1703A Proteobacteria-Gamma 1.6 1336 83 6.2%
Erwinia carotovora SCRI1043 Proteobacteria-Gamma 5.06 4472 354 7.9%
Escherichia coli K12-MG1655 Proteobacteria-Gamma 4.6 4237 354 8.4%
Escherichia coli O157:H7 EDL933 Proteobacteria-Gamma 5.5 5324 383 7.2%
Francisella tularensis Schu4 Proteobacteria-Gamma 1.89 1603 123 7.7%
Francisella tularensis WY96-3418 Proteobacteria-Gamma 1 N/A 138 N/A
Haemophilus ducreyi 35000HP Proteobacteria-Gamma 1.7 1717 88 5.1%
Haemophilus influenzae KW20 Proteobacteria-Gamma 1.83 1714 138 8.1%
Haemophilus somnus 129PT Proteobacteria-Gamma 2.01 N/A 131 N/A
Halorhodospira halophila SL1 Proteobacteria-Gamma 2 N/A 126 N/A
Idiomarina loihiensis L2TR Proteobacteria-Gamma 2.84 2628 148 5.6%
Klebsiella pneumoniae Kp342 Proteobacteria-Gamma 5.64 5772 562 9.7%
Klebsiella pneumoniae MGH78578 Proteobacteria-Gamma 5 5187 512 9.9%
Legionella pneumophila Philadelphia 1 Proteobacteria-Gamma 3.4 2942 156 5.3%
Mannheimia succiniciproducens MBEL55E Proteobacteria-Gamma 2.31 2384 176 7.4%
Methylococcus capsulatus Bath Proteobacteria-Gamma 3.3 2959 124 4.2%
Pasteurella multocida Pm70 Proteobacteria-Gamma 2.4 2015 167 8.3%
Photobacterium profundum SS9 Proteobacteria-Gamma 6.4 5480 380 6.9%
Photorhabdus lumines laumondii TTO1 Proteobacteria-Gamma 5.69 4683 241 5.1%
Pseudomonas aeruginosa PAO1 Proteobacteria-Gamma 6.3 5567 421 7.6%
Pseudomonas aeruginosa UCBPP-PA14 Proteobacteria-Gamma 6 N/A 447 N/A
Pseudomonas fluorescens Pf-5 Proteobacteria-Gamma 6.5 6137 479 7.8%
Pseudomonas fluorescens PfO-1 Proteobacteria-Gamma 6 N/A 427 N/A
Pseudomonas putida KT2440 Proteobacteria-Gamma 6.1 5350 386 7.2%
Pseudomonas syringae pv. tomato DC3000 Proteobacteria-Gamma 6 5471 322 5.9%
Rhodopseudomonas palustris CGA009 Proteobacteria-Gamma 5.46 4814 283 5.9%
Salmonella typhi CT18 Proteobacteria-Gamma 4.8 4766 346 7.3%
Salmonella typhimurium LT2 Proteobacteria-Gamma 4.8 4451 350 7.9%
Shewanella frigidimarina NCIMB400 Proteobacteria-Gamma 4.85 N/A 241 N/A
Shewanella oneidensis MR-1 Proteobacteria-Gamma 5.14 4778 216 4.5%
Shigella flexneri 2a 301 Proteobacteria-Gamma 4.7 4180 318 7.6%
Sodalis glossinidius morsitans Proteobacteria-Gamma 4 N/A 142 N/A
Vibrio cholerae El Tor N16961 Proteobacteria-Gamma 4 3835 260 6.8%
Vibrio parahaemolyticus RIMD2210633 Proteobacteria-Gamma 5.17 4832 339 7%
Vibrio vulnificus CMCP6 Proteobacteria-Gamma 5.21 4537 334 7.4%
Vibrio vulnificus YJ016 Proteobacteria-Gamma 5.21 5028 338 6.7%
Wigglesworthia glossinidia P-endosymbiont Proteobacteria-Gamma 0.7 654 25 3.8%
Xanthomonas axonopodis pv. citri 306 Proteobacteria-Gamma 5.17 4312 201 4.7%
Xylella fastidiosa 9a5c Proteobacteria-Gamma 2.68 2766 78 2.8%
Xylella fastidiosa Temecula1 Proteobacteria-Gamma 2.52 2034 76 3.7%
Yersinia pestis CO-92 Proteobacteria-Gamma 4.65 4083 293 7.2%
Yersinia pestis KIM Proteobacteria-Gamma 4 N/A 302 N/A
Yersinia pseudotuberculosis IP32953 Proteobacteria-Gamma 4.84 4038 300 7.4%
Borrelia afzelii PKo Spirochaetes 0.96 N/A 52 N/A
Borrelia burgdorferi B31 Spirochaetes 1.44 1638 50 3.1%
Borrelia garinii PB1 Spirochaetes 0.99 832 44 5.3%
Leptospira interrogans serovar lai56601 Spirochaetes 4.69 4727 113 2.4%
Treponema denticola ATCC35405 Spirochaetes 3 2767 172 6.2%
Treponema pallidum Nichols Spirochaetes 1.14 1036 39 3.8%
Thermodesulfobacterium commune DSM2178 Thermodesulfobacteria 0 N/A 67 N/A
Thermomicrobium roseum DSM5159 Thermomicrobia 3 2771 141 5.1%
Thermotoga maritima MSB8 Thermotogales 1.8 1858 95 5.1%
Eukaryota
Cyanidioschyzon merolae 10D Algae 16.52 4772 189 4%
Babesia equi WA Apicomplexa 11.7 5331 142 2.7%
Aedes aegypti Liverpool Arthropoda 1310 15419 721 4.7%
Anopheles gambiae PEST Arthropoda 278 14000 594 4.2%
Entamoeba histolytica HM1:IMSS Entamoebidae 20.8 8228 177 2.2%
Aspergillus fumigatus Af293 Fungi 32 9925 600 6%
Aspergillus nidulans FGSC A4 fungi 31 10662 683 6.4%
Aspergillus oryzae fungi 32 14063 934 6.6%
Coccidioides posadasii C735 Fungi 30 N/A 393 N/A
Cryptococcus neoformans fungi 19 5882 419 7.1%
Neurospora crassa 74-OR23-IVA Fungi 40 10082 354 3.5%
Saccharomyces cerevisiae S288C Fungi 13 6309 318 5%
Schizosaccharomyces pombe Fungi 14 4916 185 3.8%
Drosophila melanogaster Insects 120 18484 603 3.3%
Encephalitozoon cuniculi microsporidia 2.5 1996 44 2.2%
Dictyostelium discoideum AX4 Mycetozoa 34 13573 352 2.6%
Brugia malayi NIAID/TRS Nematodes 95 N/A 398 N/A
Caenorhabditis elegans Nematodes 97 16242 654 4%
Arabidopsis thaliana Plants 125 26091 1210 4.6%
Oryza sativa Plants 420 55890 1211 2.2%
Chlamydomonas reinhardtii Plants-Chlorophyta 100 15143 483 3.2%
Micromonas pusilla CCMP1545 Plants-Chlorophyta 15 10575 398 3.8%
Micromonas pusilla RCC299 Plants-Chlorophyta 15 10056 473 4.7%
Ostreococcus sp. CCE9901 Plants-Chlorophyta 11.5 7602 311 4.1%
Ostreococcus tauri Plants-Chlorophyta 11.5 7910 321 4.1%
Physcomitrella patens Plants-Streptophyta 480 35938 953 2.7%
Homo sapiens Primates 3150 37742 1022 2.7%
Paramecium tetraurelia Protists-Alveolata 100 39622 1191 3%
Aureococcus anophagefferens Protists-Stramenophiles 32 11501 647 5.6%
Ectocarpus siliculosus Protists-Stramenophiles 214 36746 637 1.7%
Babesia bovis Texas T2Bo protozoa 8.2 N/A 78 N/A
Cryptosporidium parvum genotype 2 isolate Protozoa 9.1 3396 80 2.4%
Entamoeba dispar SAW760 Protozoa 31 8734 186 2.1%
Entamoeba invadens IP1 Protozoa 32 11639 208 1.8%
Plasmodium falciparum 3D7 Protozoa 23 5259 100 1.9%
Tetrahymena thermophila SB210 Protozoa 106 24071 899 3.7%
Theileria parva Protozoa 8.4 4037 85 2.1%
Toxoplasma gondii B7 Protozoa 80 N/A 145 N/A
Trichomonas vaginalis Protozoa 180 N/A 409 N/A
Plasmodium vivax Protozoa-Alveolata 27 N/A 104 N/A
Leishmania major Friedlin Protozoa-Euglenozoa 32.8 8280 246 3%
Trypanosoma brucei TREU927/4 GUTat10.1 Protozoa-Euglenozoa 26 12692 305 2.4%
Trypanosoma cruzi CL Brener TC3 Protozoa-Euglenozoa 34 19606 373 1.9%
Phaeodactylum tricornutum CCAP1055/1 Stramenopiles 30 10402 518 5%
Thalassiosira pseudonana CCMP1335 Stramenopiles 34 11389 476 4.2%
Phytophthora infestans T30-4 Stramenopiles-Oomycetes 237 N/A 771 N/A
Phytophthora ramorum Stramenopiles-Oomycetes 200 N/A 831 N/A
Phytophthora sojae Stramenopiles-Oomycetes 200 N/A 862 N/A
Mus musculus Vertebrata-Mammalia 2700 34966 1090 3.1%