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Bacteria
Acidothermus cellulolyticus 11B (Actinobacteria)
Acinetobacter sp. ADP1 (Proteobacteria-Gamma)
Aeromonas hydrophila ATCC7966 (Proteobacteria-Gamma)
Agrobacterium radiobacter K84 (Proteobacteria-Alpha)
Agrobacterium tumefaciens str. C58 (Proteobacteria-Alpha)
Agrobacterium vitis S4 (Proteobacteria-Alpha)
Alcanivorax borkumensis SK2 (Proteobacteria-Gamma)
Alkalilimnicola ehrlichei MLHE-1 (Proteobacteria-Gamma)
Anaplasma marginale St.Maries (Proteobacteria-Alpha)
Anaplasma phagocytophilum HZ (Proteobacteria-Alpha)
Aquifex aeolicus VF5 (Aquificae)
Arcobacter butzleri RM4018 (Proteobacteria-Epsilon)
Arthrobacter aurescens TC1 (Actinobacteria)
Azoarcus sp. BH72 (Proteobacteria-Beta)
Azoarcus sp. EbN1 (Proteobacteria-Beta)
Azorhizobium caulinodans ORS 571 (Proteobacteria-Alpha)
Azotobacter vinelandii AvOP (Proteobacteria-Gamma)
Bacillus anthracis A0039 (Firmicutes)
Bacillus anthracis A2012 (Firmicutes)
Bacillus anthracis Ames (Firmicutes)
Bacillus anthracis France (Firmicutes)
Bacillus anthracis Kruger B (Firmicutes)
Bacillus anthracis USA6153 (Firmicutes)
Bacillus anthracis Vollum (Firmicutes)
Bacillus cereus ATCC14579 (Firmicutes)
Bacillus halodurans C-125 (Firmicutes)
Bacillus licheniformis ATCC14580 (Firmicutes)
Bacillus subtilis 168 (Firmicutes)
Bacillus thuringiensis konkukian 97-27 (Firmicutes)
Bacteroides fragilis NCTC9343 (Bacteroidetes)
Bacteroides fragilis YCH46 (Bacteroidetes)
Bacteroides thetaiotaomicron VPI-5482 (Bacteroidetes)
Bartonella henselae Houston-1 (Proteobacteria-Alpha)
Bartonella quintana Toulose (Proteobacteria-Alpha)
Baumannia cicadellinicola (Proteobacteria-Gamma)
Bdellovibrio bacteriovorus HD100 (Proteobacteria-Delta)
Bifidobacterium longum NCC2705 (Actinobacteria)
Bordetella bronchiseptica RB50 NCTC-13252 (Proteobacteria-Beta)
Bordetella parapertussis 12822 NCTC-13253 (Proteobacteria-Beta)
Bordetella pertussis Tohama I NCTC-13251 (Proteobacteria-Beta)
Borrelia afzelii PKo (Spirochaetes)
Borrelia burgdorferi B31 (Spirochaetes)
Borrelia garinii PB1 (Spirochaetes)
Bradyrhizobium japonicum USDA110 (Proteobacteria-Alpha)
Bradyrhizobium sp. BTAi1 (Proteobacteria-Alpha)
Brucella abortus biovar 1 str. 9-941 (Proteobacteria-Alpha)
Brucella canis ATCC 23365 (Proteobacteria-Alpha)
Brucella melitensis 16M (Proteobacteria-Alpha)
Brucella ovis ATCC 25840 (Proteobacteria-Alpha)
Brucella suis 1330 (Proteobacteria-Alpha)
Buchnera aphidicola APS (Proteobacteria-Gamma)
Buchnera aphidicola Bp (Proteobacteria-Gamma)
Buchnera aphidicola Cc (Proteobacteria-Gamma)
Buchnera aphidicola Sg (Proteobacteria-Gamma)
Burkholderia mallei ATCC23344 (Proteobacteria-Beta)
Burkholderia pseudomallei K96243 (Proteobacteria-Beta)
Caldicellulosiruptor saccharolyticus DSM 8903 (Firmicutes)
Campylobacter hominis ATCC BAA-381 (Proteobacteria-Epsilon)
Campylobacter jejuni NCTC11168 (Proteobacteria-Epsilon)
Candidatus Blochmannia floridanus (Proteobacteria-Gamma)
Candidatus Blochmannia pennsylvanicus BPEN (Proteobacteria-Gamma
)
Candidatus Pelagibacter ubique HTCC1062 (Proteobacteria-Alpha
)
Carboxydothermus hydrogenoformans Z-2901 (Firmicutes)
Carsonella ruddii PV (Proteobacteria-Gamma)
Caulobacter crescentus CB15 (Proteobacteria-Alpha)
Chlamydia muridarum Nigg (Chlamydia)
Chlamydia pneumoniae AR39 (Chlamydia)
Chlamydia trachomatis serovarD (Chlamydia)
Chlamydophila caviae GPIC (Chlamydia)
Chlamydophila pneumoniae TW-183 (Chlamydia)
Chlorobium chlorochromatii CaD3 (Chlorobi
)
Chlorobium tepidum TLS (Chlorobi)
Chrysiogenes arsenatis DSM11915 (Chrysiogenetes)
Clostridium acetobutylicum ATCC824 (Firmicutes)
Clostridium perfringens 13 (Firmicutes)
Clostridium perfringens ATCC13124 (Firmicutes)
Clostridium perfringens SM101 (Firmicutes)
Clostridium tetani E88 (Firmicutes)
Colwellia psychroerythraea 34H (Proteobacteria-Alpha)
Coprothermobacter proteolyticus DSM5265 (Firmicutes)
Corynebacterium diphtheriae NCTC13129 (Actinobacteria)
Corynebacterium efficiens YS-314 (Actinobacteria)
Corynebacterium glutamicum ATCC13032 (Actinobacteria)
Coxiella burnetii RSA493 (Proteobacteria-Gamma)
Dehalococcoides ethenogenes 195 (Chloroflexi)
Dehalococcoides sp. CBDB1 (Chloroflexi
)
Deinococcus radiodurans R1 (Deinococcus-Thermus)
Desulfotalea psychrophila LSv54 (Proteobacteria-Delta)
Desulfovibrio vulgaris Hildenborough (Proteobacteria-Delta)
Dichelobacter nodosus VCS1703A (Proteobacteria-Gamma)
Ehrlichia chaffeensis Arkansas (Proteobacteria-Alpha)
Ehrlichia ruminantium Welgevonden (Proteobacteria-Alpha)
Enterococcus faecalis V583 (Firmicutes)
Erwinia carotovora SCRI1043 (Proteobacteria-Gamma)
Escherichia coli K12-MG1655 (Proteobacteria-Gamma)
Escherichia coli O157:H7 EDL933 (Proteobacteria-Gamma)
Francisella tularensis Schu4 (Proteobacteria-Gamma)
Francisella tularensis WY96-3418 (Proteobacteria-Gamma)
Frankia alni ACN14a (Actinobacteria)
Fusobacterium nucleatum ATCC25586 (Fusobacteria)
Geobacillus kaustophilus HTA426 (Firmicutes)
Geobacter sulfurreducens PCA (Proteobacteria-Delta)
Geovibrio thiophilus AAFu3T (Deferribacteres)
Gloeobacter violaceus PCC7421 (Cyanobacteria)
Gluconobacter oxydans 621H (Proteobacteria-Alpha)
Gramella forsetii KT0803 (Bacteroidetes/Chlorobi)
Granulibacter bethesdensis CGDNIH1 (Proteobacteria-Alpha)
Haemophilus ducreyi 35000HP (Proteobacteria-Gamma)
Haemophilus influenzae KW20 (Proteobacteria-Gamma)
Haemophilus somnus 129PT (Proteobacteria-Gamma)
Halorhodospira halophila SL1 (Proteobacteria-Gamma)
Helicobacter hepaticus ATCC51449 (Proteobacteria-Epsilon)
Helicobacter pylori 26695 (Proteobacteria-Epsilon)
Hyphomonas neptunium ATCC15444 (Proteobacteria-Alpha)
Idiomarina loihiensis L2TR (Proteobacteria-Gamma)
Jannaschia sp. CCS1 (Proteobacteria-Alpha)
Klebsiella pneumoniae Kp342 (Proteobacteria-Gamma)
Klebsiella pneumoniae MGH78578 (Proteobacteria-Gamma)
Lactobacillus acidophilus NCFM (Firmicutes)
Lactobacillus brevis ATCC367 (Firmicutes)
Lactobacillus bulgaricus ATCCBAA-365 (Firmicutes)
Lactobacillus casei ATCC334 (Firmicutes)
Lactobacillus cremoris SK11 (Firmicutes)
Lactobacillus gasseri ATCC33323 (Firmicutes)
Lactobacillus johnsonii NCC533 (Firmicutes)
Lactobacillus plantarum WCFS1 (Firmicutes)
Lactococcus lactis IL1403 (Firmicutes)
Legionella pneumophila Philadelphia 1 (Proteobacteria-Gamma)
Leifsonia xyli CTCB07 (Actinobacteria)
Leptospira interrogans serovar lai56601 (Spirochaetes)
Leuconostoc mesenteroides ATCC8293 (Firmicutes)
Listeria innocua Clip11262(rhamnose-negative) (Firmicutes)
Listeria monocytogenes 4b (Firmicutes)
Listeria monocytogenes EGD-e (Firmicutes)
Mannheimia succiniciproducens MBEL55E (Proteobacteria-Gamma)
Maricaulis maris MCS10 (Proteobacteria-Alpha)
Mesoplasma florum L1 (Firmicutes)
Mesorhizobium loti MAFF303099 (Proteobacteria-Alpha)
Methylococcus capsulatus Bath (Proteobacteria-Gamma)
Mycobacterium avium K-10 (Actinobacteria)
Mycobacterium bovis AF2122/97 (Actinobacteria)
Mycobacterium leprae TN (Actinobacteria)
Mycobacterium smegmatis str. MC2 155 (Actinobacteria)
Mycobacterium tuberculosis H37Rv (Actinobacteria)
Mycoplasma capricolum (Firmicutes)
Mycoplasma gallisepticum R (Firmicutes)
Mycoplasma genitalium G-37 (Firmicutes)
Mycoplasma hyopneumoniae 232 (Firmicutes)
Mycoplasma mobile 163K (Firmicutes)
Mycoplasma mycoides PG1T (Firmicutes)
Mycoplasma penetrans HF-2 (Firmicutes)
Mycoplasma pneumoniae M129 (Firmicutes)
Mycoplasma pulmonis UAB CTIP (Firmicutes)
Nautilia sp. Am-H (Proteobacteria-Epsilon)
Neisseria gonorrhoeae FA 1090 (Proteobacteria-Beta)
Neisseria meningitidis MC58 (Proteobacteria-Beta)
Neorickettsia sennetsu Miyayama (Proteobacteria-Alpha)
Nitrobacter winogradskyi Nb-255 (Proteobacteria-Alpha
)
Nitrosococcus oceani ATCC19707 (Proteobacteria-Beta
)
Nitrosomonas europaea ATCC19718 (Proteobacteria-Beta)
Nitrosomonas eutropha C71 (Proteobacteria-Beta)
Nocardia farcinica IFM10152 (Actinobacteria)
Nostoc sp. PCC7120 (Cyanobacteria)
Oceanobacillus iheyensis HTE831 (Firmicutes)
Oenococcus oeni MCW PSU-1 (Firmicutes)
Parachlamydia sp. UWE25 (Chlamydia)
Pasteurella multocida Pm70 (Proteobacteria-Gamma)
Pediococcus pentosaceus ATCC25745 (Firmicutes)
Pelobacter carbinolicus DSM2380 (Proteobacteria-Delta
)
Pelodictyon luteolum DSM273 (Chlorobi
)
Pelotomaculum thermopropionicum SI (Firmicutes)
Photobacterium profundum SS9 (Proteobacteria-Gamma)
Photorhabdus lumines laumondii TTO1 (Proteobacteria-Gamma)
Phytoplasma aster yellows AYWB (Firmicutes)
Phytoplasma asteris OY-M (Firmicutes)
Pirellula sp. 1 (Planctomycetes)
Prochlorococcus marinus MED4(CCMP1378) (Cyanobacteria)
Prochlorococcus marinus MIT9313 (Cyanobacteria)
Prochlorococcus marinus SS120(CCMP1375) (Cyanobacteria)
Propionibacterium acnes KPA171202 (Actinobacteria)
Prosthecochloris vibrioformis DSM 265 (Bacteroidetes/Chlorobi)
Pseudoalteromonas haloplanktis TAC125 (Proteobacteria-Gamma
)
Pseudomonas aeruginosa PAO1 (Proteobacteria-Gamma)
Pseudomonas fluorescens Pf-5 (Proteobacteria-Gamma)
Pseudomonas putida KT2440 (Proteobacteria-Gamma)
Pseudomonas syringae pv. tomato DC3000 (Proteobacteria-Gamma)
Ralstonia eutropha H16 (Proteobacteria-Beta)
Ralstonia metallidurans CH34 (Proteobacteria-Beta)
Ralstonia solanacearum GMI1000 (Proteobacteria-Beta)
Rhizobium etli CFN 42 (Proteobacteria-Alpha)
Rhizobium leguminosarum bv. viciae 3841 (Proteobacteria-Alpha)
Rhodobacter sphaeroides ATCC17025 (Proteobacteria-Alpha)
Rhodopseudomonas palustris CGA009 (Proteobacteria-Gamma)
Rhodospirillum rubrum ATCC 11170 (Proteobacteria-Alpha)
Rickettsia conorii Malish7 (Proteobacteria-Alpha)
Rickettsia prowazekii MadridE (Proteobacteria-Alpha)
Roseobacter sp. MED193 (Proteobacteria-Alpha)
Roseobacter sp. TM1040 (Proteobacteria-Alpha)
Roseovarius nubinhibens ISM (Proteobacteria-Alpha)
Salmonella typhi CT18 (Proteobacteria-Gamma)
Salmonella typhimurium LT2 (Proteobacteria-Gamma)
Sar86 sp. Subtype1 (Proteobacteria-Alpha)
Sar86 sp. Subtype2 (Proteobacteria-Alpha)
Shewanella frigidimarina NCIMB400 (Proteobacteria-Gamma)
Shewanella oneidensis MR-1 (Proteobacteria-Gamma)
Shigella flexneri 2a 301 (Proteobacteria-Gamma)
Silicibacter pomeroyi DSS-3 (Proteobacteria-Alpha)
Sinorhizobium medicae WSM419 (Proteobacteria-Alpha)
Sinorhizobium meliloti 1021 (Proteobacteria-Alpha)
Sodalis glossinidius morsitans (Proteobacteria-Gamma)
Staphylococcus aureus COL (Firmicutes)
Staphylococcus aureus N315 (Firmicutes)
Staphylococcus epidermidis ATCC12228 (Firmicutes)
Staphylococcus epidermidis RP62a (Firmicutes)
Streptococcus agalactiae 2603V/R (Firmicutes)
Streptococcus agalactiae NEM316 (Firmicutes)
Streptococcus gordonii Challis NCTC7868 (Firmicutes)
Streptococcus mutans UAB159 (Firmicutes)
Streptococcus pneumoniae TIGR4 (Firmicutes)
Streptococcus pyogenes M1 (Firmicutes)
Streptococcus sanguinis SK36 (Firmicutes)
Streptococcus thermophilus CNRZ1066 (Firmicutes)
Streptococcus thermophilus LMD-9 (Firmicutes)
Streptomyces avermitilis MA-4680 (Actinobacteria)
Streptomyces coelicolor A3(2) (Actinobacteria)
Sulfitobacter sp. EE-36 (Proteobacteria-Alpha)
Sulfitobacter sp. NAS-14.1 (Proteobacteria-Alpha)
Symbiobacterium thermophilum IAM14863 (Firmicutes)
Synechococcus elongatus PCC6301 (Cyanobacteria)
Synechococcus sp. CC9311 (Cyanobacteria)
Synechococcus sp. CC9605 (Cyanobacteria)
Synechococcus sp. CC9902 (Cyanobacteria)
Synechococcus sp. WH8102 (Cyanobacteria)
Synechocystis sp. PCC6803 (Cyanobacteria)
Synergistes jonesii (Deferribacteres)
Syntrophobacter fumaroxidans MPOB (Proteobacteria-Delta)
Syntrophomonas wolfei Goettingen (Firmicutes)
Syntrophus aciditrophicus SB (Proteobacteria-Delta)
Thermoanaerobacter tengcongensis MB4 (Firmicutes)
Thermodesulfobacterium commune DSM2178 (Thermodesulfobacteria)
Thermodesulfovibrio yellowstonii DSM11347 (Nitrospirae)
Thermomicrobium roseum DSM5159 (Thermomicrobia)
Thermosynechococcus elongatus BP-1 (Cyanobacteria)
Thermotoga maritima MSB8 (Thermotogales)
Thermus thermophilus HB27 (Deinococcus-Thermus)
Thiomicrospira crunogena XCL-2 (Proteobacteria-Gamma
)
Thiomicrospira denitrificans ATCC33889 (Proteobacteria-Epsilon)
Treponema denticola ATCC35405 (Spirochaetes)
Treponema pallidum Nichols (Spirochaetes)
Tropheryma whippelii TW08/27 (Actinobacteria)
Tropheryma whipplei Twist (Actinobacteria)
Ureaplasma urealyticum serovar3 (Firmicutes)
Vibrio cholerae El Tor N16961 (Proteobacteria-Gamma)
Vibrio parahaemolyticus RIMD2210633 (Proteobacteria-Gamma)
Vibrio vulnificus CMCP6 (Proteobacteria-Gamma)
Vibrio vulnificus YJ016 (Proteobacteria-Gamma)
Wigglesworthia glossinidia P-endosymbiont (Proteobacteria-Gamma)
Wolbachia pipientis wMel (Proteobacteria-Alpha)
Wolbachia pipientis wSim (Proteobacteria-Alpha)
Wolbachia sp. TRS(B. malayi) (Proteobacteria-Alpha)
Wolinella succinogenes (Proteobacteria-Epsilon)
Xanthomonas axonopodis pv. citri 306 (Proteobacteria-Gamma)
Xylella fastidiosa 9a5c (Proteobacteria-Gamma)
Xylella fastidiosa Temecula1 (Proteobacteria-Gamma)
Yersinia pestis CO-92 (Proteobacteria-Gamma)
Yersinia pestis KIM (Proteobacteria-Gamma)
Yersinia pseudotuberculosis IP32953 (Proteobacteria-Gamma)
Zymomonas mobilis ZM4 (Proteobacteria-Alpha)
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Archaea
Aeropyrum pernix K1 (Crenarchaeota)
Archaeoglobus fulgidus DSM4304 (Euryarchaeota)
Haloarcula marismortui ATCC43049 (Euryarchaeota-Halobacteria)
Halobacterium sp. NRC-1 (Euryarchaeota)
Haloferax volcanii (Euryarchaeota)
Metallosphaera sedula DSM 5348 (Crenarchaeota)
Methanobacterium thermoautotrophicum deltaH (Euryarchaeota)
Methanococcus jannaschii DSM (Euryarchaeota)
Methanococcus maripaludis S2 (Euryarchaeota)
Methanopyrus kandleri AV19 (Euryarchaeota)
Methanosarcina acetivorans C2A (Euryarchaeota)
Methanosarcina mazei Goe1 (Euryarchaeota)
Methanospirillum hungatei JF-1 (Euryarchaeota-Methanomicrobia)
Nanoarchaeum equitans Kin4-M (Nanoarchaea)
Natronomonas pharaonis DSM2160 (Euryarchaeota-Halobacteria
)
Picrophilus torridus DSM9790 (Euryarchaeota)
Pyrobaculum aerophilum IM2 (Crenarchaeota)
Pyrococcus abyssi GE5 (Euryarchaeota)
Pyrococcus furiosus DSM3638 (Euryarchaeota)
Pyrococcus horikoshii OT3 (Euryarchaeota)
Staphylothermus marinus F1 (Crenarchaeota)
Sulfolobus acidocaldarius DSM639 (Crenarchaeota-Thermoprotei
)
Sulfolobus solfataricus P2 (Crenarchaeota)
Sulfolobus tokodaii strain7 (Crenarchaeota)
Thermococcus kodakaraensis KOD1 (Euryarchaeota-Thermococci)
Thermoplasma acidophilum DSM1728 (Euryarchaeota)
Thermoplasma volcanium GSS1 (Euryarchaeota)
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Eukaryota
Aedes aegypti Liverpool (Arthropoda)
Anopheles gambiae PEST (Arthropoda)
Arabidopsis thaliana (Plants)
Aspergillus fumigatus Af293 (Fungi)
Aspergillus nidulans FGSC A4 (fungi)
Aspergillus oryzae (fungi)
Babesia bovis Texas T2Bo (protozoa)
Babesia equi WA (Apicomplexa)
Brugia malayi NIAID/TRS (Nematodes)
Caenorhabditis elegans (Nematodes)
Chlamydomonas reinhardtii (Plants-Chlorophyta)
Coccidioides posadasii C735 (Fungi)
Cryptococcus neoformans (fungi)
Cryptosporidium parvum genotype 2 isolate (Protozoa)
Cyanidioschyzon merolae 10D (Algae)
Dictyostelium discoideum AX4 (Mycetozoa)
Drosophila melanogaster (Insects)
Encephalitozoon cuniculi (microsporidia)
Entamoeba dispar SAW760 (Protozoa)
Entamoeba histolytica HM1:IMSS (Entamoebidae)
Entamoeba invadens IP1 (Protozoa)
Homo sapiens (Primates)
Leishmania major Friedlin (Protozoa-Euglenozoa)
Micromonas pusilla CCMP1545 (Plants-Chlorophyta)
Micromonas pusilla RCC299 (Plants-Chlorophyta)
Neurospora crassa 74-OR23-IVA (Fungi)
Oryza sativa (Plants)
Ostreococcus sp. CCE9901 (Plants-Chlorophyta)
Ostreococcus tauri (Plants-Chlorophyta)
Paramecium tetraurelia (Protists-Alveolata)
Phaeodactylum tricornutum CCAP1055/1 (Stramenopiles)
Phytophthora infestans T30-4 (Stramenopiles-Oomycetes)
Phytophthora ramorum (Stramenopiles-Oomycetes)
Phytophthora sojae (Stramenopiles-Oomycetes)
Plasmodium falciparum 3D7 (Protozoa)
Plasmodium vivax (Protozoa-Alveolata)
Saccharomyces cerevisiae S288C (Fungi)
Schizosaccharomyces pombe (Fungi)
Tetrahymena thermophila SB210 (Protozoa)
Thalassiosira pseudonana CCMP1335 (Stramenopiles)
Theileria parva (Protozoa)
Toxoplasma gondii B7 (Protozoa)
Trichomonas vaginalis (Protozoa)
Trypanosoma brucei TREU927/4 GUTat10.1 (Protozoa-Euglenozoa)
Trypanosoma cruzi CL Brener TC3 (Protozoa-Euglenozoa)
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