Transporter Proteins in Dechloromonas aromatica RCB |
ATP-Dependent |
| The ATP-binding Cassette (ABC) Superfamily | |||||
| PROTEIN | SUBSTRATE | ||||
| ABC | membrane | binding protein | |||
| Daro_0154* | Lipid A export ATP-binding/permease protein msbA | ||||
| Daro_0134 | ? | ||||
| Daro_0641 | ? | ||||
| Daro_1989 | ? | ||||
| Daro_0348* | ? (Fe-S cluster assembly/ATM1 precusor) | ||||
| Daro_0013 | ? (Uup homolog/duplicated ATPase) | ||||
| Daro_0061 | ? (Uup homolog/duplicated ATPase) | ||||
| Daro_0838 | ? (Uup homolog/duplicated ATPase) | ||||
| Daro_1799 | ? (Uup homolog/duplicated ATPase) | ||||
| Daro_3856 | ? (Uup homolog/duplicated ATPase) | ||||
| Daro_3421 | ? (YhbG-YhbN) | ||||
| Daro_4150 | ? (YhbG-YhbN) | ||||
| Daro_0469 | arginine | ||||
| Daro_0250 Daro_0254 | Daro_0251 Daro_0252 | Daro_0253 | branched-chain amino acid | ||
| Daro_0273 Daro_0274 | Daro_0271 Daro_0272 | Daro_0270 | branched-chain amino acid | ||
| Daro_0364 Daro_0365 | Daro_0366 Daro_0367 | Daro_0376 | branched-chain amino acid | ||
| Daro_0524 | branched-chain amino acid | ||||
| Daro_0908* Daro_0909 | Daro_0900 Daro_0904 | branched-chain amino acid | |||
| Daro_0920 Daro_0921 | branched-chain amino acid | ||||
| Daro_1434 Daro_1435 | Daro_1436 Daro_1437 | Daro_1440 Daro_1443 | branched-chain amino acid | ||
| Daro_2356 Daro_2360 | Daro_2358 Daro_2359 | Daro_2357 | branched-chain amino acid | ||
| Daro_2712 | branched-chain amino acid | ||||
| Daro_2768 Daro_2769 | Daro_2770 Daro_2771 | Daro_2765 Daro_2772 | branched-chain amino acid | ||
| Daro_2947 | branched-chain amino acid | ||||
| Daro_3234 Daro_3235 | Daro_3236 | Daro_3241 | branched-chain amino acid | ||
| Daro_3540 | branched-chain amino acid | ||||
| Daro_4046 Daro_4047 | Daro_4044 Daro_4045 | Daro_4043 | branched-chain amino acid | ||
| Daro_4098 Daro_4099 | Daro_4096 Daro_4097 | branched-chain amino acid | |||
| Daro_4184 | branched-chain amino acid | ||||
| Daro_3717 | Daro_3716 | cell division | |||
| Daro_0137 Daro_0138 | cobalamin/Fe3+-siderophores | ||||
| Daro_4032 | Daro_4031 | cobalamin/Fe3+-siderophores | |||
| Daro_1694 | Daro_1695 | Daro_1696 | cobalt ion | ||
| Daro_1564 | Daro_1562 | Daro_1567 | copper ion | ||
| Daro_2908 | copper ion | ||||
| Daro_1888* | CydC/CydD homolog | ||||
| Daro_1319 | Daro_1317 Daro_1318 | Daro_1224 | dipeptide/oligopeptide | ||
| Daro_1167 | Daro_1168 | efflux (antimicrobial peptide?) | |||
| Daro_1841 | Daro_1842 | efflux (antimicrobial peptide?) | |||
| Daro_3462 | Daro_3463 Daro_3466 | efflux (antimicrobial peptide?) | |||
| Daro_3917 | Daro_3916 | efflux (antimicrobial peptide)? | |||
| Daro_3991 | Daro_3992 Daro_3993 | heme export | |||
| Daro_1056 | iron(III) | ||||
| Daro_1197 | Daro_1198 | Daro_1200 | iron(III) | ||
| Daro_2391 | Daro_2394 Daro_2395 | lipoprotein releasing | |||
| Daro_2835 | Daro_2836 | lipoprotein releasing | |||
| Daro_1671 | Lipoprotein releasing system | ||||
| Daro_2713 | lipoprotein releasing? | ||||
| Daro_0200 | Daro_0201 | Daro_0199 | manganese/zinc ion | ||
| Daro_1476 Daro_1477 | molybdate | ||||
| Daro_2784 | Daro_2783 | molybdate | |||
| Daro_0045* | multidrug | ||||
| Daro_0987 | Daro_0988 | multidrug | |||
| Daro_2371 | Daro_2372 | multidrug | |||
| Daro_3262* | multidrug | ||||
| Daro_3396 | Daro_3395 | multidrug | |||
| Daro_4165 | multidrug | ||||
| Daro_0701 | multidrug? | ||||
| Daro_2949 | multidrug? | ||||
| Daro_0832 | Daro_0831 | Daro_0830 | nitrate/nitrite | ||
| Daro_0079 | Daro_0080 | Daro_0081 | nitrate/sulfonate/taurine | ||
| Daro_2151 | Daro_2152 | Daro_2153 | nitrate/sulfonate/taurine | ||
| Daro_4160 | Nod factor | ||||
| Daro_2488 | phosphate | ||||
| Daro_3456 | phosphate | ||||
| Daro_3565 | Daro_3563 Daro_3564 | Daro_3562 | phosphate | ||
| Daro_4070 | phosphate | ||||
| Daro_0059 | phosphonate | ||||
| Daro_0241 | phosphonate | ||||
| Daro_1825 | Daro_1824 | Daro_1826 | phosphonate | ||
| Daro_2602 | phosphonate | ||||
| Daro_3685 | phosphonate | ||||
| Daro_4085 | phosphonate | ||||
| Daro_2881 | ribose | ||||
| Daro_3306 | sugar (glycerol-3-phosphate?) | ||||
| Daro_3690 | Daro_3691 Daro_3692 | Daro_3693 | sulfate | ||
| Daro_2134 | sulfate/thiosulfate | ||||
| Daro_1207 | Daro_1206 | Daro_1208 Daro_1209 | toluene tolerance | ||
| Daro_3402 | Daro_3401 | Daro_3398 Daro_3400 | toluene tolerance | ||
| Daro_3202* | toxin secretion | ||||
| * contains both an ABC and a membrane domain as one polypeptide | |||||
| ** contains both a membrane domain and a binding protein domain as one polypeptide | |||||
| The Arsenite-Antimonite (ArsAB) Efflux Family | |||||
| Daro_2637 |
arsenite (ArsA) | ||||
| The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily | |||||
| Daro_4107 Daro_4108 Daro_4109 Daro_4110 Daro_4111 Daro_4112 Daro_4113 Daro_4114 Daro_4115 |
protons | ||||
| The H+-translocating Pyrophosphatase (H+-PPase) Family | |||||
| Daro_3203 |
proton (vacuolar) | ||||
| The Type II (General) Secretory Pathway (IISP) Family | |||||
| Daro_0339 |
preprotein translocase SecY | ||||
| Daro_0642 |
signal recognition particle protein Ffh/SRP54 | ||||
| Daro_3718 |
signal recognition particle-docking protein FtsY | ||||
| The Mitochondrial Protein Translocase (MPT) Family | |||||
| Daro_4035 |
? | ||||
| The P-type ATPase (P-ATPase) Superfamily | |||||
| Daro_0711 Daro_1836 |
copper ion | ||||
| Daro_1051 |
copper ion | ||||
| Daro_1085 Daro_1086 Daro_1087 |
potassium ion | ||||
| Daro_1851 |
calcium ion | ||||
| Daro_1962 |
phosphoserine phosphatase | ||||
| Daro_2078 |
magnesium ion | ||||
| Daro_2257 |
zinc/cadmium/cobalt ion | ||||
| Daro_2267 |
zinc/cadmium/cobalt ion | ||||
| Daro_2631 |
zinc/cadmium/cobalt ion | ||||
| Daro_4157 |
cation | ||||
Ion Channels |
| The Ammonia Transporter Channel (Amt) Family | |||||
| Daro_0054 |
ammonium | ||||
| Daro_3703 |
ammonium | ||||
| The CorA Metal Ion Transporter (MIT) Family | |||||
| Daro_1081 |
magnesium/cobalt ion | ||||
| Daro_3905 |
magnesium/cobalt ion | ||||
| The Large Conductance Mechanosensitive Ion Channel (MscL) Family | |||||
| Daro_3333 |
large-conductance mechanosensitive ion channel | ||||
| The Small Conductance Mechanosensitive Ion Channel (MscS) Family | |||||
| Daro_2755 |
small-conductance mechanosensitive ion channel | ||||
| Daro_3158 |
small-conductance mechanosensitive ion channel | ||||
| The Voltage-gated Ion Channel (VIC) Superfamily | |||||
| Daro_0498 |
potassium ion channel | ||||
| Daro_3347 |
potassium ion channel | ||||
Phosphotransferase System (PTS) |
| General PTS | |||||
| Daro_3699 |
EnzymeI |
? | |||
| Daro_4083 |
HPr |
phosphocarrier protein HPr | |||
| Daro_4084 |
EnzymeI |
? | |||
| Sugar Specific PTS | |||||
| Daro_1083 Daro_4082 |
EnzymeIIA EnzymeIIA |
mannose/fructose | |||
| Daro_4147 |
EnzymeIIA |
mannose/fructose | |||
Secondary Transporter |
| The Arsenical Resistance-3 (ACR3) Family | |||||
| Daro_0700 |
arsenite | ||||
| Daro_2636 |
arsenite | ||||
| The Auxin Efflux Carrier (AEC) Family | |||||
| Daro_0205 |
? | ||||
| Daro_0262 |
? | ||||
| The Bile Acid:Na+ Symporter (BASS) Family | |||||
| Daro_2614 |
sodium ion:bile acid symporter | ||||
| The Benzoate:H+ Symporter (BenE) Family | |||||
| Daro_2760 |
benzoate | ||||
| The Cation Diffusion Facilitator (CDF) Family | |||||
| Daro_1043 |
cation efflux | ||||
| Daro_3337 |
cation efflux | ||||
| Daro_3764 |
cation efflux | ||||
| The Chromate Ion Transporter (CHR) Family | |||||
| Daro_3385 |
chromate ion | ||||
| Daro_3386 |
chromate ion | ||||
| Daro_3555 |
chromate ion | ||||
| The Chloride Carrier/Channel (ClC) Family | |||||
| Daro_0697 |
chloride ion channel | ||||
| The Monovalent Cation:Proton Antiporter-1 (CPA1) Family | |||||
| Daro_2072 |
sodium ion:proton antiporter | ||||
| Daro_2753 |
sodium ion:proton antiporter | ||||
| The Monovalent Cation:Proton Antiporter-2 (CPA2) Family | |||||
| Daro_2111 |
potassium/sodium ion:proton antiporter | ||||
| Daro_3169 |
potassium/sodium ion:proton antiporter | ||||
| Daro_3417 |
potassium/sodium ion:proton antiporter | ||||
| Daro_4191 |
potassium/sodium ion:proton antiporter | ||||
| The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family | |||||
| Daro_0480 |
proton/sodium ion:glutamate/aspartate symporter | ||||
| Daro_2738 |
proton/sodium ion:glutamate/aspartate symporter | ||||
| Daro_2994 |
proton/sodium ion:glutamate/aspartate symporter | ||||
| The C4-Dicarboxylate Uptake (Dcu) Family | |||||
| Daro_4182 |
C4-dicarboxylate | ||||
| The Drug/Metabolite Transporter (DMT) Superfamily | |||||
| Daro_0097 |
drug/metabolite? | ||||
| Daro_0450 |
multidrug/quaternary ammonium compound efflux (SMR subfamily) | ||||
| Daro_1098 |
drug/metabolite? | ||||
| Daro_2249 |
drug/metabolite? | ||||
| Daro_2296 |
drug/metabolite? | ||||
| Daro_2766 |
drug/metabolite? | ||||
| Daro_2828 |
drug/metabolite? | ||||
| Daro_2968 |
chloramphenicol (RarD homolog) | ||||
| Daro_3057 |
drug/metabolite? | ||||
| Daro_3903 |
multidrug/quaternary ammonium compound efflux (SMR subfamily) | ||||
| Daro_4064 |
drug/metabolite? | ||||
| Daro_4075 |
drug/metabolite? | ||||
| Daro_4081 |
drug/metabolite? | ||||
| The Formate-Nitrite Transporter (FNT) Family | |||||
| Daro_0819 |
formate/nitrite | ||||
| Daro_2100 |
formate/nitrite | ||||
| The Gluconate:H+ Symporter (GntP) Family | |||||
| Daro_0456 |
gluconate | ||||
| The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family | |||||
| Daro_0494 |
sugar | ||||
| The K+ Uptake Permease (KUP) Family | |||||
| Daro_0485 |
potassium ion uptake | ||||
| Daro_1184 |
potassium ion uptake | ||||
| Daro_3556 |
potassium ion uptake | ||||
| The Lactate Permease (LctP) Family | |||||
| Daro_1762 |
L-lactate | ||||
| The Branched Chain Amino Acid Exporter (LIV-E) Family | |||||
| Daro_4125 |
branched-chain amino acid efflux (AzlC) | ||||
| The Major Facilitator Superfamily (MFS) | |||||
| Daro_0035 |
sugar/metabolite? | ||||
| Daro_0049 |
multidrug efflux | ||||
| Daro_0128 |
muropeptide (AmpG) | ||||
| Daro_0358 |
multidrug efflux? | ||||
| Daro_0405 |
multidrug efflux | ||||
| Daro_0482 |
multidrug efflux | ||||
| Daro_0620 |
multidrug efflux? | ||||
| Daro_0825 |
nitrate/nitrite | ||||
| Daro_0827 |
multidrug efflux | ||||
| Daro_0839 |
cyanate/oxalate/formate? | ||||
| Daro_0860 |
multidrug efflux | ||||
| Daro_1015 |
multidrug efflux | ||||
| Daro_1069 |
multidrug efflux | ||||
| Daro_1077 |
multidrug efflux | ||||
| Daro_1096 |
multidrug efflux | ||||
| Daro_1135 |
multidrug efflux | ||||
| Daro_1529 |
multidrug efflux | ||||
| Daro_1677 |
multidrug efflux | ||||
| Daro_1885 |
multidrug efflux | ||||
| Daro_1984 |
multidrug efflux? | ||||
| Daro_2119 |
phthalate/tartrate? | ||||
| Daro_2818 |
multidrug efflux | ||||
| Daro_3345 |
glycerol-3-phosphate | ||||
| Daro_3581 |
oxalate/formate? | ||||
| The Multidrug/Oligosaccharidyl-lipid/Polysaccharide (MOP) Flippase Superfamily | |||||
| Daro_0708 | MVF |
virulence factor MviN | |||
| Daro_1251 | PST |
polysaccharide export | |||
| Daro_1271 | PST |
polysaccharide export | |||
| Daro_2414 | PST |
polysaccharide export | |||
| Daro_3365 | MATE |
multidrug efflux | |||
| The NhaA Na+:H+ Antiporter (NhaA) Family | |||||
| Daro_0688 |
sodium ion:proton antiporter | ||||
| The NhaD Na+:H+ Antiporter (NhaD) Family | |||||
| Daro_0683 |
sodium ion:proton antiporter | ||||
| The Ni2+-Co2+ Transporter (NiCoT) Family | |||||
| Daro_3945 |
nickel ion | ||||
| The Cytochrome Oxidase Biogenesis (Oxa1) Family | |||||
| Daro_4201 |
60 KD inner membrane protein OxaA homolog | ||||
| The Inorganic Phosphate Transporter (PiT) Family | |||||
| Daro_0679 |
phosphate | ||||
| Daro_1123 |
phosphate | ||||
| The Resistance to Homoserine/Threonine (RhtB) Family | |||||
| Daro_0303 |
Homoserine/homoserine lactone | ||||
| Daro_0933 |
amino acid efflux | ||||
| The Resistance-Nodulation-Cell Division (RND) Superfamily | |||||
| Daro_0296 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_0459 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| Daro_1178 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_1350 |
multidrug/solvent efflux (HAE3 subfamily) | ||||
| Daro_1875 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2161 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| Daro_2252 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2265 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2480 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2617 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2626 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2801 |
cobalt/zinc/cadmium ion efflux (HME subfamily) | ||||
| Daro_2958 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| Daro_3280 Daro_3281 |
protein export (SecDF) | ||||
| Daro_3343 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| Daro_3761 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| Daro_3778 |
multidrug/solvent efflux (HAE3 subfamily) | ||||
| Daro_3828 |
multidrug/solvent efflux (HAE1 subfamily) | ||||
| The Solute:Sodium Symporter (SSS) Family | |||||
| Daro_0428 |
sodium ion:proline symporter | ||||
| Daro_1637 |
sodium ion:proline symporter | ||||
| Daro_4010 |
sodium ion:proline symporter | ||||
| Daro_4155 |
sodium ion:proline symporter | ||||
| The Sulfate Permease (SulP) Family | |||||
| Daro_0571 |
sulfate | ||||
| Daro_3904 |
sulfate | ||||
| The Twin Arginine Targeting (Tat) Family | |||||
| Daro_3373 Daro_3374 Daro_3375 |
protein export | ||||
| The Telurite-resistance/Dicarboxylate Transporter (TDT) Family | |||||
| Daro_0680 |
C4-dicarboxylate/malic acid | ||||
| The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family | |||||
| Daro_0549 |
C4-dicarboxylate | ||||
| Daro_0598 Daro_0600 Daro_0601 |
mannitol/C4-dicarboxylate | ||||
| Daro_2991 Daro_2992 Daro_2993 |
C4-dicarboxylate | ||||
| Daro_3389 Daro_3390 Daro_3391 |
C4-dicarboxylate | ||||
| Daro_3576 Daro_3577 |
C4-dicarboxylate | ||||
| Daro_4021 Daro_4022 Daro_4023 |
C4-dicarboxylate | ||||
| The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family | |||||
| Daro_1606 |
zinc ion | ||||
Unclassified |
| The Ferrous Iron Uptake (FeoB) Family | |||||
| Daro_1068 |
ferrous ion | ||||